Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01243 ATGCATGGTCTCACCCATAGCAAGGGAATCATTCAGGCTGCAGATTGGAGTAGTGCTACTTCCCTTTATGAACAGGCTGCTAATCGATTTAGAGTTGCCAAGGATTATGAGAGATCAAAAGCAGCATATGAGAAAGCTTCCAAGGGACAAGAGATGCTTGCTTCCCCTTGGGATGCAGCTAAGCACATGGAATCAGCTGCTAATATGGCAAAGGAACTCAGAAACTGGAGAGAAGTTGGAGCCCGTGCTTTGGAAGAAACCATGCCTGAAGAAGCTATTCAGCTATATACTGATGTCATTACAATTCTTGAGGAAGATGGAGGAGGACAAATTGCCTTTGATCTGTATCCCAAACTGGATAAGCCAGCTTTAATATTCTGTAGCCGTGTTAAGTTCTTTAGTATTCTTGATCCAACAAGACCCTGTAATTATGTTTCTGAAATCTCTGATGCTGGATTTCTTGGTCCTCTTTTCAAGGTTACCATGGAAGAACATCCAACTGAAGCTTTCACAAACACATCAGCGGATAAGTGTTGGGAAACAATTCTTGACAGACTAAACGCTGAGATCGAGAGGTGTAAGAGTCTAGGTGAACAAGAACTCCCTCCCTTGGAGGTTTTGCAAAGCATTAATGGTCATAAAATGTTCGGATTCCTTAAGCCATCCATTATTCAGGCCATTGAAGCTCAAGATCCCAGTCATCAATGTGTAGAGTACTGGCATCACAAAGAACTTTCCTCTGAATCTTCAGGCAGTGGAAATGATGCCTCTAAGTGCTCAAATGGTTCAAGCAACTCTCTGGGTGATGTCAAGACCAAAACTTTCGGCTTCAATTTGATAAAGCAGGAGCAAGAAGATAACATAGAAGGACATTTTCATTCATTTGAAGAGATGAAGTCATTGCTACAAGGATTCCTAAAACTAAACTGA 930 0.4172 MHGLTHSKGIIQAADWSSATSLYEQAANRFRVAKDYERSKAAYEKASKGQEMLASPWDAAKHMESAANMAKELRNWREVGARALEETMPEEAIQLYTDVITILEEDGGGQIAFDLYPKLDKPALIFCSRVKFFSILDPTRPCNYVSEISDAGFLGPLFKVTMEEHPTEAFTNTSADKCWETILDRLNAEIERCKSLGEQELPPLEVLQSINGHKMFGFLKPSIIQAIEAQDPSHQCVEYWHHKELSSESSGSGNDASKCSNGSSNSLGDVKTKTFGFNLIKQEQEDNIEGHFHSFEEMKSLLQGFLKLN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01243 309 Gene3D Tetratricopeptide repeat domain 4 118 IPR011990 GO:0005515
Aip10g01243 309 SUPERFAMILY TPR-like 14 114 IPR011990 GO:0005515
Aip10g01243 309 SMART fyrc_3 157 251 IPR003889 GO:0005634
Aip10g01243 309 ProSiteProfiles FYR domain FYRC motif profile. 153 243 IPR003889 GO:0005634
Aip10g01243 309 Pfam Soluble NSF attachment protein, SNAP 17 99 - -
Aip10g01243 309 PANTHER LYSINE-SPECIFIC DEMETHYLASE 118 307 - -
Aip10g01243 309 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 118 307 - -
Aip10g01243 309 Pfam F/Y rich C-terminus 155 241 IPR003889 GO:0005634
Aip10g01243 309 Gene3D - 119 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01243 Aip-Chr10 18781022 18783606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01243 126 280 JUMONJI Transcription Factor Family AT1G30810 50.323 1.20e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01243 - - adu:107473965 290.041