Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01240 ATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCATCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTATCAAGGATATCATAAAAATTGCTGATCTTGGCCTAGCACGTGAGATCAGTTCAGAACCACCCTACACTGATTATGTCTCCACACGCTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATGTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTATTGTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCGGTGTGATAGGCAGCCCAACTATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATGAGTTCCCACAACTTGCTGGTGTGCATCTTTCGGCACTGATACCATCTGCGAGTGACGATGCAGTCAGCCTTATCAGGTCGCTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCACAGGCCCTTCAACATCCCTTTTTCCGGACTTGTTTTTACGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCGAGAACTCCTCCATCTCAGCAAGGGGTTAGGAGATATTCTAGCATGTTACCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCTTCCTTTAGCTTTGGATACGGTGAATCAGAATGAAAGTAAGAATGAGAAGTCCATGAATACTGTTCAACAATCAAAATATCGACAGCCTGGAAAGGAAAGCCCAACTTCTATGAATCTTGGTAGCCGCCCAACTCCAATGAAGGATGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGAGCTGCACAGCCGATCCTCACCGGAAGAATTTTCAGTTAA 951 0.4479 MKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVIKDIIKIADLGLAREISSEPPYTDYVSTRWYRAPEVLLQSYVYSSKVDMWAMGAIMAELLSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYEFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAQALQHPFFRTCFYVPPSLRTRAVSRTPPSQQGVRRYSSMLPNSKLTNNFSSPKLHLPLALDTVNQNESKNEKSMNTVQQSKYRQPGKESPTSMNLGSRPTPMKDGVNWISESGNFMLRAAQPILTGRIFS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01240 316 SUPERFAMILY Protein kinase-like (PK-like) 6 198 IPR011009 -
Aip10g01240 316 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Aip10g01240 316 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 209 - -
Aip10g01240 316 MobiDBLite consensus disorder prediction 253 287 - -
Aip10g01240 316 Pfam Protein kinase domain 4 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01240 316 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01240 316 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 209 - -
Aip10g01240 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 32 44 IPR008271 GO:0004672|GO:0006468
Aip10g01240 316 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01240 316 MobiDBLite consensus disorder prediction 253 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01240 Aip-Chr10 18752256 18753206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01240 13 194 Core Cell Cycle Gene Families AT2G38620 42.703 1.91e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip10g01240 Pkinase 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01240 K08829 - gmx:100810150 514.612