Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01228 ATGGCTCCAGGCGTTGGCATTTTAGTTGCCATGATTCCCAAAAATGATGAACCAGGAAGTATTCCAATAGGGAAAAAACCCTCCTTATTTGGCATAATGTCAGGTACATCTATGGCTTGCCCACATGTTACAGGTGCTGCTGCTTTCATTAAATCTGTTCATGAAATGTGGATTCCTTCAATGATCAAATCAGCATTGATGACAATAGCTACAACATACAATAACTTGAGGAAGCATGTGACCAATAGCTCAAACTTGTTTTCCTCCCCACATGAAATGGGAGTTGGGGAAATTGATCCACTTAGAGCTCTCAACCCTGGCTTAGTCTTCAAAACGGAATTAGAAGACTATCTCAAATTTCTTTGTTATTATGGCTATTCAAAGAAAAACATAAGATCAATGTCTAAGACTAACTTCAACTGCCCAAAGAACTCCTCTGAAGATCTTATATCCAATATCAACTACCCATCAATATCTATAAAAACACTTGGTAGGCATCAGAAAGCAAAAGTAGTCACAAGAACAGTCACAAATGTGGGACCCACTAATTCCACATATATTGCAAAGGTGCAAGCACCAAAGGGAATGGTTATCAAGGTTATCCACAATAAGCTTTTGTTTTATGGGGGTATTCAAAAGAGATCTTATCAAGTCTTATTCTACAACAATGATGCACAAAGTGGATACAATTTTGGGTCTATAACTTGGCTTGATGGTAAACATTATGTTCATACAATATTTGGAGTCAATACTAAATGA 759 0.3715 MAPGVGILVAMIPKNDEPGSIPIGKKPSLFGIMSGTSMACPHVTGAAAFIKSVHEMWIPSMIKSALMTIATTYNNLRKHVTNSSNLFSSPHEMGVGEIDPLRALNPGLVFKTELEDYLKFLCYYGYSKKNIRSMSKTNFNCPKNSSEDLISNINYPSISIKTLGRHQKAKVVTRTVTNVGPTNSTYIAKVQAPKGMVIKVIHNKLLFYGGIQKRSYQVLFYNNDAQSGYNFGSITWLDGKHYVHTIFGVNTK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01228 252 PANTHER PEPTIDASE S8 2 246 - -
Aip10g01228 252 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 246 - -
Aip10g01228 252 Pfam Subtilase family 29 75 IPR000209 GO:0006508|GO:0008236
Aip10g01228 252 SUPERFAMILY Subtilisin-like 1 110 IPR036852 GO:0004252|GO:0006508
Aip10g01228 252 ProSitePatterns Serine proteases, subtilase family, serine active site. 35 45 IPR023828 -
Aip10g01228 252 Gene3D Peptidase S8/S53 domain 1 117 IPR036852 GO:0004252|GO:0006508
Aip10g01228 252 Gene3D - 121 251 - -
Aip10g01228 252 ProSiteProfiles Serine proteases, subtilase domain profile. 1 104 - -
Aip10g01228 252 Pfam Fibronectin type-III domain 152 245 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01228 Aip-Chr10 18607678 18620718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01228 2 252 Subtilisin-like Serine Gene Family AT1G20150 39.623 4.44e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01228 K25898 - aip:107621931 514.612