Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01215 ATGGATAGTGGCAGCGAAGGGAACTCGGACTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCCGAAGAGGAAGAGGAAGAGGTGTCTAAGGGGTTAGAGTCACCGTCACGAGTGGGCAAGGATAATGAGCCGGTAGAGAGAGTTGATGTATTTGGTGAAGGGGACAATGGTGGCAGAATGCCTTCATCGGAGTCACCACGTGGTTCAGGCGATCAAATGAGTGATGATGTGGACACTTCGATGCTTTCAACCGCGGCTGCATTGGCCGATGCCGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTGGATTTGCGATTCGAAAAGGGGATTCCATTAAAGATGATGAAGGCAATGTTGTGAGGAAATTTTTCTATTGCAATCGACAGGGCTTGCAGGAGAAGAAGCATTATGAGAGGGCGGATAGGAAAAGGGCGCATAAGGCAGAGACTAGGACCAACTGTAGTGCGAAGTTCATTGTATTTTTAGACAAACAGTGTGGCAAGTGGAGGACGAAGATATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAACGTGATGGCAGCTCACCGCAATATCAACGAAGGTGATAAAGCCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAATCAGATCATGGGGTTCTTTTCATATTTGTCCGGGGGTTATCGAAACTTGCACTTCATAAAGAAGGATGTTTACAACTATATCGACAATGTACGTCGCTCTCGGATTGTTCAGGGCGATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACCGAGATGGATCCATTAGCTGTTGTGATGTACACATATTGTCCCGAAAACCACCTTGGTCATCTGTTTTGGTCAGACGGAGCAATGCAGTATGACTATGAGTGCTTTGGTGACGTGTTGGCATTTGATTCGACATATAGGAAGAATCTATACAACCAGCCTTTAGTAATATTTTCTGGCACTAATCACCACCGACAGACAATAATTTTTAGTTTCGGGTTGTTGGAGGATGAGAAAATTCCATCTTATAAGTGGCTGCTAGGCACTTTCCTTGAGGTCATGCATCAAAAACAGCCCAAAGTTTTGGTTATAGATAGATACGAGTCAATGAAGGAGGCTATTAGGACAGAATTCCCTAATGCCACGCATCGACTTTGCACCTGGCACTTAGCGCGGAATGCTGTTTCAAACATCAAGGATAATGATTTTTGTTCTGCTTTTAAGACTGCTGTGTATGGTCATTTTGAGGTAGAGGAGTTTGATCAATATTGGGCAGACATGGTTGCTGCATTCGGGTTACAGGAGAACAAATGGATTTGGGCAACGTACGAGAAGAGGGTACATTGGAAAAATGCGTATTTGTGTGATACGTTTTGTGCTGGGTTGAGAACGACGTCAAGATGCGAGGGTATTAATGCATCGCTTAAAAGGTTTATCAAGTCCTCGAATTGTTTGTTGGAGTTGGTCGAGAATCTTGAACGTGTGGTTAAGGACTACAGGAATAATGAGTTTATCGCGGATTATAAATCTCTATATTCAGAACCGGTCATAACCACTGGGTTGGAATCAATTGAGAGGGCCATGTCACAAATCTACACTAGAGAGATATTTTTCGAGGTTAAGAAACAGATTGAAGGGGTGGCTGCGTTGATAGTTCTTCATAGGGAGAGTTATGGTAGCACAGAGAAATTCATGTTTAGAAAGTTTCGTAAGCCCCGTCGGGTTTACTCTGTACTGTATGAAAGCAACTCTGAAAGGTATGAGTGTTCTTGCAAGCTTTGGAACAGCATAGAAATTCCATGCAGCCATATCATCTGTGTTTTGAAAGAGCTGGAGAAGGATGCCTTGCCAATGCGGTTGGTGCTGAAAAGGTGGTGCAAAAATGCTAAGTCTGGATCATTCCACGACTCGGACGGAGGTTTGGATAGTAATAGAGCATTTCGAGGGCGATATGGTTCATTGTGGACTTCTTTCCTCCCTATGTGTTTGTTAGCGGCTCAACGGCCTGCCACGTACAAGTACGCTGCTGCCAAGATAGCGCAGCTATTAAAAGAGATTGAAGCGGAAGTTTCGAAGGGTAACAGTTCAACTTTCGTGCATGATACTGTAGATGGTGAAGATATTTTAGATCCAAAGATTATCAAGTCAAAAGGTGCACCGCGGTCAACCGGCAACGGCAAAATGGCTAGGCGATGCAAGCGCGGCCACGGTTTTGGACATGATCGGCGAAATTGCACAGCAAACAAGGAGGACATGTTAGATGAGTCATTAGGGTTCGATTTGAGACAAAGTCAGCATGGTGGAAAAAGATCTTGCCGTGCCAAGAATTGTGGGGTCAGCCAAGACACCATTTCTGCATGA 2409 0.4454 MDSGSEGNSDFSGQWTDGWSSESEEEEEEVSKGLESPSRVGKDNEPVERVDVFGEGDNGGRMPSSESPRGSGDQMSDDVDTSMLSTAAALADAEFHGVEEAYARYVEYAKATGFAIRKGDSIKDDEGNVVRKFFYCNRQGLQEKKHYERADRKRAHKAETRTNCSAKFIVFLDKQCGKWRTKIFVQDHNHDLTLPAFTNVMAAHRNINEGDKAHIHSMHEAGFQTNQIMGFFSYLSGGYRNLHFIKKDVYNYIDNVRRSRIVQGDAAAAISYLKGKTEMDPLAVVMYTYCPENHLGHLFWSDGAMQYDYECFGDVLAFDSTYRKNLYNQPLVIFSGTNHHRQTIIFSFGLLEDEKIPSYKWLLGTFLEVMHQKQPKVLVIDRYESMKEAIRTEFPNATHRLCTWHLARNAVSNIKDNDFCSAFKTAVYGHFEVEEFDQYWADMVAAFGLQENKWIWATYEKRVHWKNAYLCDTFCAGLRTTSRCEGINASLKRFIKSSNCLLELVENLERVVKDYRNNEFIADYKSLYSEPVITTGLESIERAMSQIYTREIFFEVKKQIEGVAALIVLHRESYGSTEKFMFRKFRKPRRVYSVLYESNSERYECSCKLWNSIEIPCSHIICVLKELEKDALPMRLVLKRWCKNAKSGSFHDSDGGLDSNRAFRGRYGSLWTSFLPMCLLAAQRPATYKYAAAKIAQLLKEIEAEVSKGNSSTFVHDTVDGEDILDPKIIKSKGAPRSTGNGKMARRCKRGHGFGHDRRNCTANKEDMLDESLGFDLRQSQHGGKRSCRAKNCGVSQDTISA 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01215 802 Pfam MULE transposase domain 315 409 IPR018289 -
Aip10g01215 802 MobiDBLite consensus disorder prediction 1 19 - -
Aip10g01215 802 MobiDBLite consensus disorder prediction 64 79 - -
Aip10g01215 802 MobiDBLite consensus disorder prediction 1 79 - -
Aip10g01215 802 Coils Coil 498 518 - -
Aip10g01215 802 ProSiteProfiles Zinc finger SWIM-type profile. 592 628 IPR007527 GO:0008270
Aip10g01215 802 MobiDBLite consensus disorder prediction 32 55 - -
Aip10g01215 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 744 IPR031052 GO:0006355
Aip10g01215 802 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
Aip10g01215 802 PANTHER OS02G0262500 PROTEIN 89 744 - -
Aip10g01215 802 SMART 26again6 603 630 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01215 Aip-Chr10 18293157 18295676 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01215 MULE 2.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01215 - - ahf:112803395 1013.83