Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01210 ATGACTAAAGACTCTTTCTACATAGTTCCAATTCTGGTTATTTTTGAAACGGAGGAAGAAATTATATATATAAATGAGGCATACATAGTTGAAGAGCTTGAAAATAATTCACAAGAGGAAGCCCTATATGCATTGAAGTTATCATTGAATGCTTCAAAAAATCAGCTTACTAACTGGAATAGAGACCAAGTTAGCCCGTGCACTTGGTCTAATGTTTACTGTGACCCAAGTGGCAATATTTATCAAGTTTCACTAGCATTTATGGGATTTACAGGATACTTGACACCAAGAATAGGAGCATTAAAAGGTCTTCAAACTCTTGTTCTAAATGGGAATGGCATCACTGGAGGTATACCAAAAGAATTAGGAAACCTTACAAGATTAGTCAGATTGGATCTGCAAAACAACAGATTAACCGGTGAAATACCCTCTTCCCTTGGTAACCTTAAAAAGCTTCAGTTCTTAACATTGAGTCAAAACAACCTCAACGGATCTATTCCTGAATCATTAGCCAATCTTCCAAGCCTGATCAATGTTCTTCTAGATTCAAATGATCTCAGTGGTCAGATTCCAGAAGGCTTATTCAATGTTTCTAAATACAATTTCACTGGAAATAAGTTGAACTGTGGCATGAATTATCGTAAACTTTGTGCATATGATATTGCAGACCAAGTTTTAGGTTTGGTTGTTATTATTTGTCTTGGTGGTCTACTGTTCTTCTGGCGCAAGAGCTACAAGCGTGATGTTTACGTAGATGTTGCAGGTGAAGTTGATGGGCGAATTGCATTTGGTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGGTTAACCGATTATGAAAGTCCCGGTGGAGATGCTGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAACTTGTTACGGCTGATTGGGTTCTGTACGACTCCAACGGAGCGCCTATTAGTCTATCCCTTCATGCAGAACCTAAGTGTTGCCTATCGTCTTCGAGAACTTAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATCCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGGAGACTTCGAGGCAGTTGTAGGAGACTTCGGTTTAGCAAAGTTAGTTGACGTTCGAAGGACTAATGTGACAACTCAAGTTCGTGGGACCATGGGCCACATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTCTTCGGATATGGAATAATGCTTCTAGAGCTTGTTACAGGTCAACGCGCAATTGACTTTTCACGTTTGGAAGAGGAAGACGATGTGCTGTTGCTTGACCATGTTAAGAAACTTGAACGGGAGAAAAGACTAGATGCTATTGTTGATCGCAATCTGAAACAAAATTACAAAATAGAAGAAGTTGAAATGATTGTTCAAGTTGCATTACTCTGCACACAAGCATCACCAGAGGACCGACCAGCAATGTCGGAGGTCGTGAGAATGTTGGACGGAGAAGGACTGGCCGAAAGGTGGGAGGAATGGCAACACGTAGAGGTCAACCGGAGGCAGGATTACGAGAGACTGCAAAGAAGATTGGGGTGGGGAGAAGATTCAATAAATAACCAAGATGCCATTGAGTTGTCTGGTGGAAGATGA 1815 0.4127 MTKDSFYIVPILVIFETEEEIIYINEAYIVEELENNSQEEALYALKLSLNASKNQLTNWNRDQVSPCTWSNVYCDPSGNIYQVSLAFMGFTGYLTPRIGALKGLQTLVLNGNGITGGIPKELGNLTRLVRLDLQNNRLTGEIPSSLGNLKKLQFLTLSQNNLNGSIPESLANLPSLINVLLDSNDLSGQIPEGLFNVSKYNFTGNKLNCGMNYRKLCAYDIADQVLGLVVIICLGGLLFFWRKSYKRDVYVDVAGEVDGRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDGDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKQNYKIEEVEMIVQVALLCTQASPEDRPAMSEVVRMLDGEGLAERWEEWQHVEVNRRQDYERLQRRLGWGEDSINNQDAIELSGGR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01210 604 SUPERFAMILY L domain-like 36 208 - -
Aip10g01210 604 SMART serkin_6 281 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01210 604 Pfam Protein kinase domain 282 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01210 604 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Aip10g01210 604 SUPERFAMILY Protein kinase-like (PK-like) 263 555 IPR011009 -
Aip10g01210 604 Gene3D Transferase(Phosphotransferase) domain 1 358 575 - -
Aip10g01210 604 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 34 604 - -
Aip10g01210 604 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Aip10g01210 604 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Aip10g01210 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Aip10g01210 604 Gene3D Ribonuclease Inhibitor 35 219 IPR032675 -
Aip10g01210 604 PANTHER LRR RECEPTOR-LIKE KINASE 34 604 - -
Aip10g01210 604 ProSiteProfiles Protein kinase domain profile. 281 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01210 604 Gene3D Phosphorylase Kinase; domain 1 250 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01210 Aip-Chr10 18179880 18185833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01210 27 604 Receptor kinase-like Gene Family AT5G10290 72.773 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip10g01210 Pkinase 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01210 - - gmx:100793416 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01210 10 18179880 18185833 Aip03g04914 03 133662865 133668771 PCT