Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01208 ATGGCAATTACACATTTTGGTAGTACATTTGCAACTCAATGGGGAATTCGTCCTCAGGTTTTCGCAAGATCCAGCATGGTGAGCAAGACTACATCATCCAGCCACAATGTTACAAGCAGGGTGAGCTTTATAGCGGCCCCAGCTTCAAGCTTTTTCTCCCGGGATTCCTCACGTGCGCTATTTAACATGAGTTCATCTCAGACATATCACCGAAGGGGTTCAAGGTTGATAGTTAGAGCAGAAACAGATTACTATTCTGTCCTTGGCGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGATCCTGGTGCAGAACAGAAATTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCGATATATGATCAATATGGAGAGGCCGGGCTTAAAGGTTCAGGAATGGGCATGGGGGATTTCAGCAGTCCTTTTGATATATTTGAAACGCTTTTTGAGGGCATGGGTGGCATGGGTGGCATGGGTTCAAGAGGTGCTTGGAATGGAGCAATTGACGGCGAAGACGAATATTACAGTCTTGTTTTGAACTTCAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGGTTAGATAGCTGTGGCACTTGCAATGGTTCAGGGGCTAAACCGGGGACCAAGTCATCCAGATGTAGCACTTGTGGCGGTCAAGGTCGCGTTGTCTCATCAACCAGGACCCCTCTAGGCATCTTTCAGCAGTCTATGACCTGCTCTTCCTGCAATGGAACCGGAGAAACATCAACACCATGCAGCACATGTTCTGGGGATGGTCGTGTGAGGAAAACAAAACGGATAAGTCTTAAGGTTCCCCCTGGTGTGGATTCTGGTAGCCGTTTAAGAGTCCGGAATGAAGGCAATGCTGGAAGACGTGGCGGTGCACCTGGTGACCTCTTTGTAGTTATCGAAGTTATCCCAGATCCTGTCCTCAAACGAGATGACACCAACATTCTGTACACCTCCAAGGTGTCTTATATTGATGCTATCTTGGGGACTACAATCAAGGTTCCTACTGTAGATGGCATGGTGGATTTAAAAGTCCCGGCTGGGACTCAACCCGGCACAACGCTCGTTATGGCTCGGAAAGGTGTTCCGCTGCTGAATAAGAGTAACATGAGAGGTGATCAATTGGTTCGCGTGCAAGTCGAAATCCCCAAGAGACTGAGTAGTGATGAGAGAAAACTTATCGAGGAACTTGCTGATTTGAGCAAAGGAAAGACTAAAGCTGCTGCTAGTGGTACTAGGAGATAA 1335 0.4614 MAITHFGSTFATQWGIRPQVFARSSMVSKTTSSSHNVTSRVSFIAAPASSFFSRDSSRALFNMSSSQTYHRRGSRLIVRAETDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDQYGEAGLKGSGMGMGDFSSPFDIFETLFEGMGGMGGMGSRGAWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEIRRLDSCGTCNGSGAKPGTKSSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGDGRVRKTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGAPGDLFVVIEVIPDPVLKRDDTNILYTSKVSYIDAILGTTIKVPTVDGMVDLKVPAGTQPGTTLVMARKGVPLLNKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTKAAASGTRR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01208 444 Gene3D - 193 328 - -
Aip10g01208 444 MobiDBLite consensus disorder prediction 298 317 - -
Aip10g01208 444 Pfam DnaJ central domain 223 286 IPR001305 GO:0031072|GO:0051082
Aip10g01208 444 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Aip10g01208 444 CDD DnaJ_zf 223 286 IPR001305 GO:0031072|GO:0051082
Aip10g01208 444 Gene3D - 333 443 - -
Aip10g01208 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 290 IPR036410 -
Aip10g01208 444 CDD DnaJ 83 136 IPR001623 -
Aip10g01208 444 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Aip10g01208 444 PRINTS DnaJ domain signature 85 103 IPR001623 -
Aip10g01208 444 PRINTS DnaJ domain signature 103 118 IPR001623 -
Aip10g01208 444 PRINTS DnaJ domain signature 119 139 IPR001623 -
Aip10g01208 444 PRINTS DnaJ domain signature 139 158 IPR001623 -
Aip10g01208 444 PANTHER BNAA01G34580D PROTEIN 32 435 - -
Aip10g01208 444 SUPERFAMILY Chaperone J-domain 79 185 IPR036869 -
Aip10g01208 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 424 IPR008971 GO:0006457|GO:0051082
Aip10g01208 444 Gene3D DnaJ domain 80 183 IPR036869 -
Aip10g01208 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 435 - -
Aip10g01208 444 Hamap Chaperone protein DnaJ [dnaJ]. 80 438 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip10g01208 444 Pfam DnaJ domain 83 144 IPR001623 -
Aip10g01208 444 TIGRFAM DnaJ_bact: chaperone protein DnaJ 83 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip10g01208 444 Gene3D - 223 286 - -
Aip10g01208 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 191 346 IPR008971 GO:0006457|GO:0051082
Aip10g01208 444 SMART dnaj_3 82 139 IPR001623 -
Aip10g01208 444 Pfam DnaJ C terminal domain 198 413 IPR002939 -
Aip10g01208 444 ProSiteProfiles Zinc finger CR-type profile. 210 291 IPR001305 GO:0031072|GO:0051082
Aip10g01208 444 CDD DnaJ_C 194 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01208 Aip-Chr10 18085135 18089717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01208 84 146 C2H2 Transcription Factor Family AT1G74250 43.478 8.15e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01208 K03686 - gmx:100786143 720.694