Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01202 ATGAGATTGTGCACTCTTGTCGAAGACATCTTCCCAAGGAAAACAGCCGATTGGAAGAAATTCCAGCGGCTGATTCCTTTCCCGGCAACCTTCTCTCCAGTGGCTGACTCGTTGCGATATCGTCTCCCTCCGTTATCGAAGCAGCAAGGTTCACATCTTGTAGGGCCTTCCATTCAATCAAGGAAAGTTGTAGTATTATGTTCATCAGGATTGGGGAGGAAGCATTATATGACATGGGAGTTGAAGCAGAAGAATACGTTGGTAACTATGAAAGCAAGGATGATGGGCATAACGATAGATGGGTTCAAGTGGGATGAAGGAGTGGGACCAGATGATGTCCTTCGAATGGAGTTTAATACTCTCGATGAAGTCAGGCAAGGATATCGAGAGAAAAAATGGCTAGAGATGGCTAATCGAAAGAGGGAGCATAAGATTATGACTCGTTGTGGTTGTCTTGCCAAGATGAGGATAAAACGAAAAAATGGGAGTTGCAAATGGTATATGTCTCAGTTTATGGATGAGCATAATCATGAACTTACATCTCGCAAGTACATTGATTATTTGAGGTTGCACAGGAGGATATCTGATGTAGAGATTGCACAAATGACTAGCATGAGGGAGGTTGGTATCAGCATTCCCAAAATATATGAATCTTTTGCGGCACAAGTTCGGAGTTTTAACCTTGTGACATTCACAAAGCAGGACATGTATAATGAGGTTAGATCCGAAACCAATCTTTGTGACCTATTTTGGAGCGACAGGCGCAGCCAGTTTGACTATGTCGTATTCGGAGATGTTCTTGCCTTCGATGCTACGTATGGCCGAAACAAGTACAATTTGCATGTCGTTGTGTTTTTGGGAGTTAACCACCACAACCAAACCTGGTCTTTGGATATGCAATGGTTTCATGCGAATTATAAGAGTCCTACATTTGGGTTCTACAACAGTTTTTGGAATGCATCAGGGGCTGATTGTGCATTGCTCGGGCACTGA 993 0.432 MRLCTLVEDIFPRKTADWKKFQRLIPFPATFSPVADSLRYRLPPLSKQQGSHLVGPSIQSRKVVVLCSSGLGRKHYMTWELKQKNTLVTMKARMMGITIDGFKWDEGVGPDDVLRMEFNTLDEVRQGYREKKWLEMANRKREHKIMTRCGCLAKMRIKRKNGSCKWYMSQFMDEHNHELTSRKYIDYLRLHRRISDVEIAQMTSMREVGISIPKIYESFAAQVRSFNLVTFTKQDMYNEVRSETNLCDLFWSDRRSQFDYVVFGDVLAFDATYGRNKYNLHVVVFLGVNHHNQTWSLDMQWFHANYKSPTFGFYNSFWNASGADCALLGH 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01202 330 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 233 IPR031052 GO:0006355
Aip10g01202 330 PANTHER OS02G0262500 PROTEIN 239 294 - -
Aip10g01202 330 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 239 294 IPR031052 GO:0006355
Aip10g01202 330 PANTHER OS02G0262500 PROTEIN 128 233 - -
Aip10g01202 330 Pfam FAR1 DNA-binding domain 125 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01202 Aip-Chr10 17978698 17981989 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01202 FAR1 1.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01202 - - adu:107478815 276.174