Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01193 ATGCTACAGTGTATTAGAATGGAAGAACGGTATGATATTATCAAAGATATTGGGTCTGGCAACTATGGCGTTGCAAAGCTTGTTAAGGACAAACGCAGCGGTGCTCTCTATGCTGTTAAGTTCATTCACAGAGGCCATAAGATTGATGAGCATGTGCAAAGAGAGATTATAAATCATAGGTCCTTAAAACATCCCAATATCATTAGATTTAAGGAGGTATTGTGTACTCCAACTCATCTAGCCATAGTGATGGAATATGCCGCCGGGGGAGAACTATTTGAAAGAATATGCAATGCTGGAAGATTCAGTGAGGACGAGGCGAGATATTTCTTCCAGCAATTGATTTCAGGAGTTAGCTATTGCCATTCAATGGAAATATGCCATAGGGATCTTAAGCTGGAAAACACACTTTTAGATGAAAGCTCAGCACCACGACTTAAAATATGCGACTTTGataattgcacggagtatttcacatattctatgttatttttttacCTAACTATAATGTTTTCTTTTTTTTTTTCTCAGTCATCGGTTTTGCACTCACAACCTAAATCTACGGTGGGAACGCCAGCTTATATTGCACCGGAAGTATTATCAAGAAGAGAATACGATGGAAAGGTTGCTGATGTTTGGTCCTGCGGAGTAACCTTATATGTGATGCTAGTGGGCGGTTATCCTTTTGAAGATTCGGATGATCCACGAAACTTCAAAGAAACTCTTAAGAGAATTCTCAATGCCCACTATTTTATTCCAAACTATGTTCGTGTCTCAAAGGATTGTGGACACCTTCTATCTCAAATATTTGTAGCAAACCCAGAAAAGAGAATAACCATACCTGAAGTTAAAATGCACCCGTGGTACCTAAATAACTTGCCAGAGGAATTGATGGACCAAAGGGGATGCGAGTTGCAAAATATTGGTGTGGATGATGATGATGATTCATCATGTCAAAGCATTGAGTCAATACTTTCAATAATTCAAGAGGCTAGAAATTTAGGAGTGGGAAAAAAACTCAGTGGACAATTTGTTGCGGGTGACATTGATCTTGATGACATGGATGCTGAAATTGATGATATTGAAAATGGTGGCGATGATTTTGTATGTGCATTGTGA 1119 0.3762 MLQCIRMEERYDIIKDIGSGNYGVAKLVKDKRSGALYAVKFIHRGHKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDESSAPRLKICDFDNCTEYFTYSMLFFYLTIMFSFFFSQSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDSDDPRNFKETLKRILNAHYFIPNYVRVSKDCGHLLSQIFVANPEKRITIPEVKMHPWYLNNLPEELMDQRGCELQNIGVDDDDDSSCQSIESILSIIQEARNLGVGKKLSGQFVAGDIDLDDMDAEIDDIENGGDDFVCAL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01193 372 ProSiteProfiles Protein kinase domain profile. 11 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01193 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Aip10g01193 372 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Aip10g01193 372 SMART serkin_6 11 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01193 372 PANTHER SERINE/THREONINE KINASE 172 362 - -
Aip10g01193 372 Gene3D Transferase(Phosphotransferase) domain 1 87 296 - -
Aip10g01193 372 Pfam Protein kinase domain 11 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01193 372 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Aip10g01193 372 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 172 362 - -
Aip10g01193 372 PANTHER SERINE/THREONINE KINASE 9 154 - -
Aip10g01193 372 SUPERFAMILY Protein kinase-like (PK-like) 5 302 IPR011009 -
Aip10g01193 372 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 9 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01193 Aip-Chr10 17640831 17658247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01193 4 314 CBL-interacting serine-threonine protein kinases AT4G24400 37.025 5.07e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip10g01193 Pkinase 2.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01193 K14498 - gmx:100807981 525.783