Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01175 ATGGAGTTTTCTACACCTGAGGAGGCAAGCAGCTTCTATAACAACTACAGCCGACTAAAGGGCTTTTCCTCAATGCGCGATAAGACGGTTAGAAACACTTTCAGTGAGATTGTGAGGTACATGTTCGTTTGTAACAGGCAAGGGTTTCAAGAGAAGAAGTTGTTGGAAAAGGTTGATCGCAAAAGGGATCATAAGGTTGTAACCCGATGCAGATGTCTTGCCGAGATGAGGATAAAGCGGAAAGACGGTAGTGGGAAGTGGTACGTGTCGCGTTTCGTCGAGGAGCATAATCATGAACTAGCGTTCGGCAAGCTTGTGGATTATCTACGGTCACATAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATTCCAAAGATTTATAAGTCATTTGCACCACAACTTGTGAGTTTCAACCTGGTTACATTTACAAAGCAAGATATGTATAATGAGGTGGGGGTAGGCCAACACCTGTGCAACTTGTTTTGGAGCGACGGTCGTTGTCAGGAAGATTATTCCGTGTTCGGCGATGTGCTAGCATTTGATGCTACGTACGGTCGTAACAAGTATAACCTCCCTGTTGTTGTGTTCTCCGGAGTAAACCACCACAACTAG 642 0.4502 MEFSTPEEASSFYNNYSRLKGFSSMRDKTVRNTFSEIVRYMFVCNRQGFQEKKLLEKVDRKRDHKVVTRCRCLAEMRIKRKDGSGKWYVSRFVEEHNHELAFGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYKSFAPQLVSFNLVTFTKQDMYNEVGVGQHLCNLFWSDGRCQEDYSVFGDVLAFDATYGRNKYNLPVVVFSGVNHHN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01175 213 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 166 212 IPR031052 GO:0006355
Aip10g01175 213 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 151 IPR031052 GO:0006355
Aip10g01175 213 Pfam FAR1 DNA-binding domain 11 101 IPR004330 -
Aip10g01175 213 PANTHER OS02G0262500 PROTEIN 166 212 - -
Aip10g01175 213 PANTHER OS02G0262500 PROTEIN 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01175 Aip-Chr10 17160247 17160990 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01175 FAR1 3.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01175 - - aip:107620408 379.022