Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01168 ATGTCTGTTGCTATATTGAAGAACATGTTTAGATCGGTGCTTCAAGCTGTTGGTGCCACCACTTCTTCAGATACCAGTTCTTCATATTACCCATCATCGTATAGTAGCATGTTTCAAGACACAACATCATGCGAAAGTTCGAGTTGTTCTAGGCCAAGAAGTGTGTCCATAACACACTACAAGTCATTGTGCCACAACAACAATAAGAGTGTTATGGTGGAGTGTTGCGTGTGCCTCACAGGGTTCGAAGCGAATCAAGAGGTTAGCGAGTTGCCTTGCAAGCATTTCTTCCACACAAGCTGCTTAGACAAATGGTTTGATAACATGCACACCACTTGCCCTTTGTGCCGTTCATTCTCCTAG 363 0.438 MSVAILKNMFRSVLQAVGATTSSDTSSSYYPSSYSSMFQDTTSCESSSCSRPRSVSITHYKSLCHNNNKSVMVECCVCLTGFEANQEVSELPCKHFFHTSCLDKWFDNMHTTCPLCRSFS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01168 120 PANTHER F21J9.24-RELATED 1 119 - -
Aip10g01168 120 ProSiteProfiles Zinc finger RING-type profile. 75 117 IPR001841 -
Aip10g01168 120 PANTHER - 1 119 IPR044249 -
Aip10g01168 120 Pfam Ring finger domain 74 117 IPR001841 -
Aip10g01168 120 SMART ringv_2 74 117 IPR011016 GO:0008270
Aip10g01168 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 119 IPR013083 -
Aip10g01168 120 SUPERFAMILY RING/U-box 59 118 - -
Aip10g01168 120 SMART ring_2 75 116 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01168 1 118 C3H Transcription Factor Family AT2G04240 34.127 4.91e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01168 K16285 - gmx:100811790 133.65