Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01164 ATGGACCACACAGGGCAACGAGATTCACAACCGAATGGGTTTGTGGAGCCTAACTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCGCAGGATGCTGATGATGGAATGAGCGGCGAAATTGTGCCGGTAGAGGAAGCAGAAGCGATGGATTCGTCCGCCGCAGATGCGGACATAGATGCAGAAGCAGGAGTGAGGATTGTTGAAGGGATAGGGTCCTTTGGCGCCATTAAATTTTCTTCCCTCACAGCCAAGGACGTCCTTACAACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATACGGTCGCATCAAGGGATTCTCGGTCAGAGGTCCAAGGAAGAAGGATCCTCGACCGATCACGTGGTGCGGGTGCGAAGCCCGGATTAAGGTCCACGTTGATGATGCCAGCGGGCGATGGTTTGTTGAACAATTCTTCGACAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGTAGGGGATTTGCACCAAATCAATTCCATGAGGAAATCTGGGTTGCGGGTGCCGACGATTTTCTGCGTGTTTGCCAATCAGTCAGGAGGATTTGAGACTATTGGGTTCGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGGCTGGCGCGACAAATGCGGAGTCCGCGTTGAAGTTCTTGGGAACTTTAAGGACGACTGATTCTGGGATGTTCTGGAAGTACTCGCTGGATGTTGACAAGAGGCTGGAAAATCTCTTCTGGTGCGATGGTACAAGTCGTTATGACTACAGCGTGTTCGGTGATGTCCTGGGTTTTGATGCAACTTACGTCGTAGCAAATACAAGTGCCCTTTGGTAA 888 0.5011 MDHTGQRDSQPNGFVEPNYEFSSNFDRVHASQDADDGMSGEIVPVEEAEAMDSSAADADIDAEAGVRIVEGIGSFGAIKFSSLTAKDVLTTEFTSLQAAYDYYNEYGRIKGFSVRGPRKKDPRPITWCGCEARIKVHVDDASGRWFVEQFFDNHNHPMLDARFRGLSRSHRAVKVGDLHQINSMRKSGLRVPTIFCVFANQSGGFETIGFEIKDIYNAIEKQRRAGATNAESALKFLGTLRTTDSGMFWKYSLDVDKRLENLFWCDGTSRYDYSVFGDVLGFDATYVVANTSALW 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01164 295 PANTHER OS02G0262500 PROTEIN 119 288 - -
Aip10g01164 295 Pfam FAR1 DNA-binding domain 118 159 IPR004330 -
Aip10g01164 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 119 288 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01164 Aip-Chr10 16789500 16790929 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01164 FAR1 3.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01164 - - aip:107633138 447.973