Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01161 ATGTCAACAAGAAGGAGTAACATAGGCGCGTGGGCCGCCGATGCTGAGCGAGCAGAGGAGGAGGAGCAGGAGGCTGCGGCCGCCGCGGCCATTGCCGGAGGTAGTGGAGACGCCAGATCGTTTGACTTCCCGAGCCTGAAGGAGGCCGTGAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTCATGGAGTTCAACAACTCCGCCGGCAGCGGTGGTGGTGGCGGGGGATTCGCGAGGGAGCAGAGGGGCTTAACGCCAGACGAGATGCTCCGCCTCCCGACAGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTTTCTAACTACGGAGGCGGCCGCTCTGTCCCGCCGCCTGGCCGAGGTCTGGACCGTAACGACGGCGACGGTTCCTGGGGCGGAGGGAGGAGATCCTATGGCGATTTCGATGAAGAGCGCAGGGGCGGTCCTCGTTCTAGGGTTTCGGATTTCGATCAACCTTCGAGGGCCGACGAGGTGGACAATTGGGCTTCGTTGAAGAAACCGGTTCCGGCATTCGATTCCGGTCGGCAAAACCGGTACGGCTCTCTCGGCGGTGGAGGTGGCAGTAGTGGTGGCAATGGAGATGGTGGTGTTGGTGGTTCTAGGGCGGATGAAGTGGATAATTGGATGGCTGGTAAGAAGTCTCTTCCTGTTAGATCTTCCACGTTTGGTTCTGGGTTCCGCGATTCAGGTCCAGAGCCTGATCGCTGGACACGTGGCAAGCGTGACACACGTGACTTACGTGACAGCGATCGGGAGCGGCCGATATTGGTGCTGGACCCGCCGCAAGGCAACGGTTCCGTGAACGAAATGGAGGCAGTGGTGAAGACGAACAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCGGAGAAGGGATTGGATTGGAAGAAGCTCGATTCGGAGATTGAATCAAAGAGGCCTATAAGTGCACACTCCAGCAGGCCCTCCAGCGCGCAATCGAGTTGCTCCGAGGGGCCTGCCGGGTTGCAGGTGAAGCCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAGAAGATTGATCTTGAATTGGAGCATCGCCGTTTTGATAGGCCAGAAACAACCGAGGAAAAATTGCTGAAAGAAGAAATTGATAACTTGAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATGAAGTAGACACAACCAATAAAGAATCAATGTTACTTCAGAAAGAAAGGGAGCTGGAAATTCTTACCCGTGATTTAGATAACAAAATTCGATTTGGGCAAAAAGCCATTGAAGGTCCAGGCTCGGCAATAGGAAGGACTACTGGTTTTCCTGATAGACCGCCTTCTCAATCTGGCACGTTTGAGGATTCTAGAAGTGTTGATTCTGCAGACAGACCTCGATCCCGTGGCACAGGAGATATGTGGCCACGTTCTAATGAGGGCAGAGGACCGTTACGTTCTAACGAGGACAGAAGACCATTACGTTCTAACGAGGACAGAGGACCATTTCAAGGTAGCAGGGACAGAGGATGGTTTCAGAATAGCAGAGACTTAGATAGGTCCAGGTCAAAAGAGAGGTGGTGA 1857 0.4766 MSTRRSNIGAWAADAERAEEEEQEAAAAAAIAGGSGDARSFDFPSLKEAVSTKPKKKKMSLMEFNNSAGSGGGGGGFAREQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSVPPPGRGLDRNDGDGSWGGGRRSYGDFDEERRGGPRSRVSDFDQPSRADEVDNWASLKKPVPAFDSGRQNRYGSLGGGGGSSGGNGDGGVGGSRADEVDNWMAGKKSLPVRSSTFGSGFRDSGPEPDRWTRGKRDTRDLRDSDRERPILVLDPPQGNGSVNEMEAVVKTNKPNPFGAARPREEVLAEKGLDWKKLDSEIESKRPISAHSSRPSSAQSSCSEGPAGLQVKPKVNPFGDAKPREVLLEEKGMDWKKIDLELEHRRFDRPETTEEKLLKEEIDNLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVDTTNKESMLLQKERELEILTRDLDNKIRFGQKAIEGPGSAIGRTTGFPDRPPSQSGTFEDSRSVDSADRPRSRGTGDMWPRSNEGRGPLRSNEDRRPLRSNEDRGPFQGSRDRGWFQNSRDLDRSRSKERW 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01161 618 MobiDBLite consensus disorder prediction 242 266 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 324 341 - -
Aip10g01161 618 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 404 IPR010433 GO:0003743
Aip10g01161 618 MobiDBLite consensus disorder prediction 574 596 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 1 306 - -
Aip10g01161 618 Coils Coil 485 500 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 319 353 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 603 618 - -
Aip10g01161 618 Pfam Plant specific eukaryotic initiation factor 4B 488 581 IPR010433 GO:0003743
Aip10g01161 618 Pfam Plant specific eukaryotic initiation factor 4B 1 403 IPR010433 GO:0003743
Aip10g01161 618 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 404 - -
Aip10g01161 618 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 485 618 - -
Aip10g01161 618 Coils Coil 390 401 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 517 618 - -
Aip10g01161 618 MobiDBLite consensus disorder prediction 141 172 - -
Aip10g01161 618 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 485 618 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01161 Aip-Chr10 16749821 16754535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01161 495 618 Eukaryotic Initiation Factors Gene Family AT3G26400 41.935 1.27e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01161 - - adu:107469131 657.907