Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01131 ATGCTCAAGAATGGCATGGAGGGAGCTTGGAAGAAAGGATCAAGCTATGGATCTACATATACTACACAGTTTGTTTACGCATCAGCAAGATGCATGCCAGACCTCATCAGCCACTCATCTATAGGAGTGGATGGTTTGTTTAGTGGGACAAAAGAAGGTGGTATACGGTGCTTCCATGCTAGTCCTGCAGTCTGGGCAAGAAGAGGTGATGAGCCATTTGGGTTAAAGACCCCAAAGAAGGAGAAGTACATAAGAAGGGAAGGTAGAAACCAGCCACCTGTTGAAGCTCGATATGTCCCTCGTAATGTGAAAGCACCAAAATCTAATTCTGATAAAACAGTAGAAATCTTTGAAGGCATGACCCTTGATGAACTGGCGAAGCGCACTGGAAAATCAGTATCTTCTTTGCAGGATATCCTCACAAATGTTGGTGAAAAGTTAGAATCAGAGTTTGAGCCTCTCAGCATGGATATTGTAGAGCTTGCTGCAATGGAGGTTGGGGTCAATGTGAAGAGGTTACATTCGGCTGAGGGTACTGAAATCGTACCTCGTCCTCCGGTTGTAACTGTGATGGGCCATGTTGATCATGGTAAAACTTCTCTTCTTGATGCCTTGCGTCAAACATCAGTGGCAGCCAGAGAGGCTGGTGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGTCATGCCATCTGGAGCATCAATCACGTTTCTCGACACCCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGCGCAGCAGTCACGGATATAGTAGTGCTAGTTGTTGCCGCAGATGACGGAGTGATGCCTCAAACACTTGAAGCCATGTCCCATGCAAAAGCAGCTAAAGTACCAATTATAGTTGCAATTAATAAATGTGATAAACCAGGTGCAAATCCTGAGAAAGTGAAACTGCAGCTTGCTTCGGAGGGCTTACTGCTGGAGGAGATGGGTGGTGATGTTCAGGTCATTGAAGTTTCAGCACTTCAAAAATCTGGATTGGATAACCTAGAGGAAGCTTTACTTCTTCAGGCTGAAATGATGGATCTGAAGGCACGAATTGATGGGCCTGCTCAAGCTTATGTGGTAGAAGCAAGGCTTGACAAAGGACGTGGTCCATTGATAACTACCATAGTAAAGGCAGGAACCTTAACTTGCGGTCAGCATGTGGTTGTAGGCTCAGAGTGGGGAAGAATAAGAGCTATTAAAGACATGGCAGGAAGGTTAACTGAACGAGCAACTCCTGCAATGCCTGTTGAGATTGAAGGGCTTCGAGGCTTGCCAATGTCTGGTGATGATGTTATTGTTGTTCATTCTGAGGAGCGAGCCAGAATGCTGAGTTCTGGTAGGACAAGGAAGTCCGAGGAGAATAGACTTAGGAGGAAATTGAATGAGGACACCCCATCTACTTTGGAATCATCTGAGGAGGTTCCACAGAGGGTTGAGATGCCAGTAATAGTAAAAGCAGATGTTCAGGGAACTGTTCAAGCTGTTACTGATGCATTAAGAACTTTAAATAGTTCTCAGGTTCTTGTGAATGTTGTTCATGTTGGTGTTGGCCCTATTTCTCAATCTGATGTGGACTTGGCACAAGCTTGTGATGCGTGCATAGTTGGATTCAATATCAAGAGTCCACCTATTGCTCTTAGTCAGGCAGCAACTCGTGCCAGTATCAAGGTGATTCTGCACCGTGTTATTTACCACCTTCTGGAGGACATAGGAAATTTGATAATAGAGAAGGCGCCGGGTACTTTTGAGACCCAGGTAGCTGGTCAGGCAGAGGTGCTGAACATCTTTGAGGTGAAGGGCAGCAAAACAAAGGGACCTGATGTTAAGATTGCCGGGTGTCGGGTTGTAGAAGGTTTTGTGGCAAGGACGGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTTGTGTTTGAAGGGCTTTGTGCATCTCTTAAGCGGGAGAAGCAGGATGTGGACAGTGTGAAGAAGGGTAATGAGTGTGGATTAGTGATCAATGATTGGTATGATTTCAAGATTGGAGATGTTATTCAGTGCTTGGAACAGGTTGTGAGGAAGCCCAAGTTCATAAAGTCAGAGAGTGGTGCTGTTCGAATTGAGTGCTGA 2115 0.4591 MLKNGMEGAWKKGSSYGSTYTTQFVYASARCMPDLISHSSIGVDGLFSGTKEGGIRCFHASPAVWARRGDEPFGLKTPKKEKYIRREGRNQPPVEARYVPRNVKAPKSNSDKTVEIFEGMTLDELAKRTGKSVSSLQDILTNVGEKLESEFEPLSMDIVELAAMEVGVNVKRLHSAEGTEIVPRPPVVTVMGHVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVVMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAAKVPIIVAINKCDKPGANPEKVKLQLASEGLLLEEMGGDVQVIEVSALQKSGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLITTIVKAGTLTCGQHVVVGSEWGRIRAIKDMAGRLTERATPAMPVEIEGLRGLPMSGDDVIVVHSEERARMLSSGRTRKSEENRLRRKLNEDTPSTLESSEEVPQRVEMPVIVKADVQGTVQAVTDALRTLNSSQVLVNVVHVGVGPISQSDVDLAQACDACIVGFNIKSPPIALSQAATRASIKVILHRVIYHLLEDIGNLIIEKAPGTFETQVAGQAEVLNIFEVKGSKTKGPDVKIAGCRVVEGFVARTGTMRLLRSGEVVFEGLCASLKREKQDVDSVKKGNECGLVINDWYDFKIGDVIQCLEQVVRKPKFIKSESGAVRIEC 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01131 704 Pfam Translation-initiation factor 2 468 575 IPR023115 -
Aip10g01131 704 Gene3D Translation factors 587 689 - -
Aip10g01131 704 PANTHER TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL 57 695 - -
Aip10g01131 704 SUPERFAMILY Translation proteins 588 689 IPR009000 -
Aip10g01131 704 Gene3D - 481 585 IPR036925 -
Aip10g01131 704 MobiDBLite consensus disorder prediction 448 471 - -
Aip10g01131 704 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 480 593 IPR036925 -
Aip10g01131 704 CDD IF2_eIF5B 186 350 - -
Aip10g01131 704 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 183 353 IPR000795 GO:0003924|GO:0005525
Aip10g01131 704 TIGRFAM small_GTP: small GTP-binding protein domain 186 339 IPR005225 GO:0005525
Aip10g01131 704 Pfam Elongation factor Tu GTP binding domain 188 344 IPR000795 GO:0003924|GO:0005525
Aip10g01131 704 SUPERFAMILY Translation proteins 357 439 IPR009000 -
Aip10g01131 704 MobiDBLite consensus disorder prediction 448 479 - -
Aip10g01131 704 Gene3D - 180 355 IPR027417 -
Aip10g01131 704 Hamap Translation initiation factor IF-2 [infB]. 21 690 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Aip10g01131 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 374 IPR027417 -
Aip10g01131 704 CDD IF2_mtIF2_II 359 452 IPR044145 -
Aip10g01131 704 TIGRFAM IF-2: translation initiation factor IF-2 111 687 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Aip10g01131 704 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 57 695 IPR015760 -
Aip10g01131 704 CDD mtIF2_IVc 593 682 - -
Aip10g01131 704 Gene3D Translation factors 356 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01131 Aip-Chr10 15860529 15866230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01131 174 668 Eukaryotic Initiation Factors Gene Family AT1G76810 27.128 2.50e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01131 K02519 - gmx:100781314 1093.18