Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01117 ATGGACACATTTGGATCAATGGAGCTTGATTTCTCTTCATACACCCAGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTGACTCTAGGGTTACAACAGCACGGTGGAAGCGGGGTGAGTCTGGCGTTCCCTCTTCCTCCGGTGAGCAGTCATCATAGCTCGCTCTTCTACGCAACAACAATTGATGCTACTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGGTAAGGGCTAGAATCAGAGATGTTCACTTTTTACCTTTCAATTCTATTGACAAGAGAACTGCTCTGACTTACATTGATGCTGATGGAAACTGGCACCGTGCAAGCAAAGGCGCTCCGGAGCAGGGAACAATTTTTAGTTTATTCATGATTTGTGAGAGGGATGATGCTAAGAAGATGGTTCATGCCATTATTGACAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGATTTACAAAGTGTTCTTTGCTTTTTCCTAATTTCATCTTCATTAGAGAGGATGACCAGCGCATCTGAATCCTACAAGCGCATGAAACAAGGATGA 618 0.4482 MDTFGSMELDFSSYTQQQQQQQGFNGVSLTLGLQQHGGSGVSLAFPLPPVSSHHSSLFYATTIDATMPTIVGMAPKNQDAIDAAIVGMLADPKEVRARIRDVHFLPFNSIDKRTALTYIDADGNWHRASKGAPEQGTIFSLFMICERDDAKKMVHAIIDKFAERGLRSLAISRQDLQSVLCFFLISSSLERMTSASESYKRMKQG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01117 205 PANTHER PLASMA MEMBRANE ATPASE 76 176 - -
Aip10g01117 205 PANTHER CALCIUM-TRANSPORTING ATPASE 76 176 - -
Aip10g01117 205 Gene3D - 58 198 IPR023299 GO:0000166
Aip10g01117 205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 75 180 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01117 Aip-Chr10 15482309 15486481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01117 76 176 Primary Pumps ATPases AT2G24520 67.647 3.93e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01117 K01535 - ahf:112801147 217.624