Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01108 ATGGAGTTTCTTGATTTCTTCATGGTAGCAACAAGTACCATAGGCTTCATCTTAGTATGCAAAAATGTCTTGTATTTTGTGAAGTGGGTATGGGGAATGTTCTTAAGGGCTCCAAAGAATCTAAAAGAGTATGGTTCATGGGCCATGATCACTGGATCCACCGATGGAATTGGCAAAGCCATGGCACATGAATTGGCATCTAAGGGTCTCAACCTTCTCTTGGTTAGTAGAAACCCTAAAAAGCTTGAAGCCACATCCAATGAAATAAGAGACAAAAATAGTGGCAATGTTGAAATAAAATGTTTAGCAATTGATTTTGCAAAAGAAAATGGAGAGGAAATTATGAAAAGGGTTGAGGAAGAAATTGAGGGTTTGGATGTGGGTATTCTTGTAAATTGTGCTGGGTGGACACATGCTTATGCTAGGTACTTTCATGAGGTTGATTATGAGATGATAAATGGTACCATAAAAGTTAATGTGGAAGGAACAATTTGGGTCACAAAGGCAGTGATTCCTAGTATGATCAAGAAGAAGAAAGGAGCAATCATAAACCTTGGATCTGGTTCTACTTTTCTTCTTCCATCATATCCCTTGTTTACCGTCTATGCTGCTACTAAACGATCTGTGGAAATGTTCTCGAGATGCATTAACTTGGAATACAGGCATAAAGGAATTGACATCCAGTGTCAGGTTCCATTATATGTGTCAACGAAGTTAACAAAGCTGGGAACTTCTGTGTTTGTTCCAACGCCAGAGAAGTATATAAAATCATGCACAAGATGGATTGGGTATGAAACTGTGGTGGTGCCTTACTTGCTACATTCTCTTCAGGCATTTACAGTGAGGGCAATTCCTGAGACATTTGTTGATTCCTATATGCTGCGTTACTTTCTCTATTGGCGCAAAAAAGGACTCTTCAAAGACGCTAAAATTAAAGCATTGGAAGCATCCAAGTCCTAA 960 0.3896 MEFLDFFMVATSTIGFILVCKNVLYFVKWVWGMFLRAPKNLKEYGSWAMITGSTDGIGKAMAHELASKGLNLLLVSRNPKKLEATSNEIRDKNSGNVEIKCLAIDFAKENGEEIMKRVEEEIEGLDVGILVNCAGWTHAYARYFHEVDYEMINGTIKVNVEGTIWVTKAVIPSMIKKKKGAIINLGSGSTFLLPSYPLFTVYAATKRSVEMFSRCINLEYRHKGIDIQCQVPLYVSTKLTKLGTSVFVPTPEKYIKSCTRWIGYETVVVPYLLHSLQAFTVRAIPETFVDSYMLRYFLYWRKKGLFKDAKIKALEASKS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01108 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 301 IPR036291 -
Aip10g01108 319 Gene3D - 41 270 - -
Aip10g01108 319 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Aip10g01108 319 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Aip10g01108 319 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Aip10g01108 319 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Aip10g01108 319 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Aip10g01108 319 Pfam short chain dehydrogenase 47 241 IPR002347 -
Aip10g01108 319 PIRSF 11-beta-HSD1 1 307 - -
Aip10g01108 319 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 2 310 - -
Aip10g01108 319 CDD 17beta-HSD1_like_SDR_c 45 287 - -
Aip10g01108 319 PANTHER RH59310P 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01108 Aip-Chr10 15304683 15307747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01108 14 309 Lipid Metabolism Gene Families AT1G67730 51.852 5.69e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01108 K10251 - gmx:100816067 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04464 03 128922448 128935875 Aip10g01108 10 15304683 15307747 PCT