Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01099 ATGCTTCCAGATGAGATTCTTGAGCGTGTTATTGGGATGCTAAAATCAAGAAAGGACAGAAGCTCTGTGTCACTGGTTTGCAAGGAGTGGTACAACGCTGAGAGATGGTCAAGGAGGAACGTGTTCATAGAGCTTAGGCTTAAGAGGATGACTGTTACTGATGAGAGTTTGAAGTTCTTGGTGCGCTCTTTTCCAAACTCCAAAGCTATTTCCCTTCAAAATTGTGATGGTTTCAGCACTGATGGTTTGGCTGCAATTGCTGCTGATTGCAAAAATTTGATGTGGAGACGAGATGTTGCTTTCGCGGGCTATGAGGTCGCAATACAAATGGATATTTCTGCTGAAAAGATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTGCATCCTGACAAGAACCCTGGTGATGAGGAGGCTAAAGCAAACTTTCAGCAACTGCAAAATGTTATCTCGATTCTTGGGGATGAAGAAAAGCGAGTCATTTATGATCAGATTGGTTGTGTTGATGATGCTGACCTTGCCGGGGATGTTGTCCAGAATCTTCACAACTACTTTAGAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAAAGTGTAGAAGTGTTTGTTTGGATTGGCCAGTCTGTGGACCCAAAAGAAAAACAAAATGCTTTTGAAATTGGCCAGAGCTATATAGATAAGGCTGTGTCACTGGAGGGACTATCTCCTCGGGTACCGCTATATAAAGTAACAGAAGGGAATGAACCATGCTTTTTCACAACATACTTTCCATGGGACCATGCTAAAGCTTCGGTTCAGGGGAACTCTTTCCAGAAAAAGGTGACATTATTCTTCGGGATTCACCATGCTGTAGAGGAAAAGTCTAATGGGCCAAGTCAAGGGGGACCAAGACAAAGAGCTGAAGCTTTCTCTGCCTTGTCTAATGCCTTTAATTCATCTTCTGATATGACATCCAGTATGTCACAGGATAGATTGAATGGGCTGAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCTTTAAACTCTGCATTTAAATCATCATCCGGAACCAAAAGTTCTAGCCCTAAGACAACTGGAAGAAGTCAAGGATCACAAAGAGCAACATCAGTAGCTGCTCTCTCTCAAGTTCTTACTGCTGAGAAGAAGAAACAATCACCTGATTCTTCTCCTGTGCCAACCAGAAGTCCTGTTGTGGAAACTAGCACTTCCATTCCACTACCACCGCCGCCACCCTCAATGTCTTCGGATGAGGACTATGATGATGATGAGGATGAAGATGACACTGAAGACTATAGCTGA 1404 0.4323 MLPDEILERVIGMLKSRKDRSSVSLVCKEWYNAERWSRRNVFIELRLKRMTVTDESLKFLVRSFPNSKAISLQNCDGFSTDGLAAIAADCKNLMWRRDVAFAGYEVAIQMDISAEKMIFGVAGIDPERRAELIKVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKANFQQLQNVISILGDEEKRVIYDQIGCVDDADLAGDVVQNLHNYFRTMYKKVTEADIEESVEVFVWIGQSVDPKEKQNAFEIGQSYIDKAVSLEGLSPRVPLYKVTEGNEPCFFTTYFPWDHAKASVQGNSFQKKVTLFFGIHHAVEEKSNGPSQGGPRQRAEAFSALSNAFNSSSDMTSSMSQDRLNGLNQGGPRQRAEALAALNSAFKSSSGTKSSSPKTTGRSQGSQRATSVAALSQVLTAEKKKQSPDSSPVPTRSPVVETSTSIPLPPPPPSMSSDEDYDDDEDEDDTEDYS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01099 467 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
Aip10g01099 467 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 130 230 IPR042977 -
Aip10g01099 467 MobiDBLite consensus disorder prediction 379 467 - -
Aip10g01099 467 Pfam DnaJ domain 134 193 IPR001623 -
Aip10g01099 467 SUPERFAMILY F-box domain 2 34 IPR036047 GO:0005515
Aip10g01099 467 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 130 230 - -
Aip10g01099 467 SUPERFAMILY Actin depolymerizing proteins 232 305 - -
Aip10g01099 467 MobiDBLite consensus disorder prediction 343 367 - -
Aip10g01099 467 Pfam F-box 2 40 IPR041567 -
Aip10g01099 467 ProSiteProfiles dnaJ domain profile. 131 196 IPR001623 -
Aip10g01099 467 SMART dnaj_3 130 188 IPR001623 -
Aip10g01099 467 SUPERFAMILY Chaperone J-domain 132 213 IPR036869 -
Aip10g01099 467 MobiDBLite consensus disorder prediction 450 467 - -
Aip10g01099 467 PRINTS DnaJ domain signature 168 188 IPR001623 -
Aip10g01099 467 PRINTS DnaJ domain signature 133 151 IPR001623 -
Aip10g01099 467 PRINTS DnaJ domain signature 151 166 IPR001623 -
Aip10g01099 467 PRINTS DnaJ domain signature 188 207 IPR001623 -
Aip10g01099 467 MobiDBLite consensus disorder prediction 379 436 - -
Aip10g01099 467 Gene3D Ribonuclease Inhibitor 39 95 IPR032675 -
Aip10g01099 467 CDD DnaJ 134 185 IPR001623 -
Aip10g01099 467 Gene3D Severin 225 306 IPR029006 -
Aip10g01099 467 Gene3D - 1 38 - -
Aip10g01099 467 MobiDBLite consensus disorder prediction 343 361 - -
Aip10g01099 467 Gene3D DnaJ domain 126 206 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01099 Aip-Chr10 15118338 15123275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01099 135 193 C2H2 Transcription Factor Family AT1G74250 39.062 3.95e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01099 - - gmx:100788765 297.36