Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01049 ATGGAGTCGGACGAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACACTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCAAGGAGGATATTTTCCGGTTTAATTTCGCAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGAAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACGTGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCTACGGTTTTATGGTGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCATGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGATACGTGGTTGCATTTGATGTAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAGCCAAACGGTTGTCTTTGCCACCGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGTTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAACACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCAGCGATGCTTGATGTTTGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTAACAGGGCCTGTGTAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTACGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTGCAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCTAG 1998 0.4985 MESDEYDFQEDETEHDHHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYTVDSVESIGWIDFLNLSKEDIFRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNRKKRPRAETRCGCPARMLLRMDDESGRWLVAYFSDVHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIYGFMVSLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGYVVAFDVTYKKNVYLSPLVVFSGVNHHSQTVVFATALVADEKEETYVWLFQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVQDMYERRHSWATTHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFQRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAAENYTRAIFYLFVPILNRACVMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDTREVRCTCMRMECFGVPYEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKF 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01049 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 660 IPR031052 GO:0006355
Aip10g01049 665 ProSiteProfiles Zinc finger SWIM-type profile. 571 607 IPR007527 GO:0008270
Aip10g01049 665 MobiDBLite consensus disorder prediction 11 25 - -
Aip10g01049 665 PANTHER OS02G0262500 PROTEIN 71 660 - -
Aip10g01049 665 MobiDBLite consensus disorder prediction 1 38 - -
Aip10g01049 665 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Aip10g01049 665 Pfam MULE transposase domain 294 388 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01049 Aip-Chr10 13892983 13894980 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01049 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01049 - - ahf:112770447 1258.43