Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00987 ATGAAGAGGAATCCTCGAAAAGTAAAATGGACCAAGGCGTATAGGCGGGTGCATGGAAAGGATATGACTCAGGATTCAACCTTTGAATCAGTCACCAGGGAGGAGAGGCACCATAAGAATAGAATGAAGGGCAAGAAAGAAAAGATACAAAAGGAGGCAGCAAAGGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTTGGCCCTTCAGAAGGACCCATCTACCACAAAAGATCAAACTGTGGCCGTCATAACAAACCTTTATGGTTTTAGTGTCGCGGTCTTGCAATTGGTCGTGTGTAGGGCGCACTGTGTGGCTACCATGTCGCACGCGGCATCACTCCTTTCCCGTGGCCGTCGTAGCCGCGGGAAAAAGAATCGGGTCCCAAAGCTGATCATTGTCGCCGCTCTATGTGTTGTCACCGTTCGCACTCACACGGACGCCTTCAATATGGTCCTCCTCGCCGTTTGA 474 0.5042 MKRNPRKVKWTKAYRRVHGKDMTQDSTFESVTREERHHKNRMKGKKEKIQKEAAKELEQGISLVKAPLALQKDPSTTKDQTVAVITNLYGFSVAVLQLVVCRAHCVATMSHAASLLSRGRRSRGKKNRVPKLIIVAALCVVTVRTHTDAFNMVLLAV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00987 157 Coils Coil 39 59 - -
Aip10g00987 157 Gene3D Ribosomal protein L24e 1 27 IPR038630 -
Aip10g00987 157 MobiDBLite consensus disorder prediction 21 37 - -
Aip10g00987 157 PANTHER BNAA04G10330D PROTEIN 1 29 - -
Aip10g00987 157 PANTHER 60S RIBOSOMAL PROTEIN L24 1 29 IPR000988 -
Aip10g00987 157 PANTHER BNAA04G10330D PROTEIN 32 78 - -
Aip10g00987 157 PANTHER 60S RIBOSOMAL PROTEIN L24 32 78 IPR000988 -
Aip10g00987 157 MobiDBLite consensus disorder prediction 21 49 - -
Aip10g00987 157 Pfam Ribosomal protein L24e 1 24 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00987 Aip-Chr10 12725467 12727001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00987 1 69 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 43.878 7.01e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00987 K02896 - gmx:100793564 114.775