Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00981 ATGAACAACATAAACCAAGAGGCGATATCAACGTCAGCCAATCATGAATCGGCGGTGCCAGAGCCGGAGGACGGGATTTTGAATGAGGAAACACTTTTTGACATGAGCATGTTAGGGGACGAAGAAGGGTTTCCGAATATGACGCAGACAAAGGTGGAGCCTGAATCTGCTCAGGTACCAAGTCATGTCAGCGTTGAAGATGTGCTGAAGATGGAGTTCTTTACCCCTGGGGAAGCAAGGGAATTCTACACGAGTTATAGTAGGTTAAAAGGTTTTGCAATAAGGAACAGTAAGACGGTAAAAAATGCTAAAGGAGATATCGTTAGATACAATTTTGTTTGCAACAGAGAAGGATTTAGGCAGAAGAAGTGGTTAGATAAGCCCGATAGGAAAAGAGAGTACAAGCCTATAATGCGATGTGGGTATGTAGCAGAGATGAGGATAAAGAAGAATCATGGTAATGGAAAATGGTATGTTTCACAGTTTGTGGATGATCATAACCACACCCTACTCCCAGAAAGGTTTATTGGATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGCGGCAAGTTGGGATAAGCATTCCGAAGATATACCAGTCATTTGCGATGCAGAGCGGAGATGTGAATGCCGCGCTACGTTTCTTCGAACATGCTGCCAGAAACGATGAGAGACTGTTTTGGAGGTATGAGGTGGCGGCTGGTTCTCGCATGTGTGACATTATATGGAGTGATGGTCGAAGCCAGGAAGATTATGAGGCGTTCGGTGATGTCCTCGCCTTTGATGCGACCTATGGGAGGAACAAGTATAACTTGCCGGTTATTGTTTTGTCCGGTGTTAATCACCATAATCAGACATGCGTGTTTGCAGCAGCAATGGTTTCATGTGAGTCACAGGATTCGTACAAATGGGTGCTGAGACGGTTTCTAGAATGCATGCGGGGAAAGGCCCCGAAGGCATTTATAACTGATGGGGATCCTTCTATGAGGCTAGCTATTATGCATGTATTTCCAGATGCTCATCACAGACTATGCGCGTGGCACCTACTAAGGAATGCCACTGCTCATGTCTCGCAACCACGTTTCACACAGTTATTCAAACAGTGCATGCTCGCTGACATAGAGGTTCATGAATTTGAGAGGCAGTGGGAGGCGATGGTTGGGGAGTGTGGTGTTCGAGAGGTTGAATGGGTGATGGACCTCTATAGTAAGAAGTTGTCATGGGCAACCGCGTACATACGGGGCAGATTCTTTACAGGTTTAAGGACAACCTCTCGGTGCGAGTCGTTGCATGCTAAGTTGGGTGGGTTTGTGGAGAGTAGATATGGGATATTGGACTTTATTACAAATTTTCAGAGATGTGTTGATTTCCTAAGAGACAAGGAGGAGGAGCTTGACTTTCGTTCCTTTTACGGTACCCCGGTGCTTCAAACGCACTTTCAAGAGATTGAGAGGTCAGCGGCGACCCTGTATACCCGTGAAGTATTTTATAGATTTCGAGAGACCTTAAAGCGGGTTGTGAGATTTAACATTATCGACCGGGAGGATTGTGAAAACGGATGCTGCTACGTGATACAAAAGTATCGCCGACCGGAGTCAACTTGGCAAGTGTTGCACCAGCCGCAGAATGGAACCTTTGAATGTAATTGCCACAGGATGGAGTCATATGGGATCCCTTGTGTTCACATAATTTTTGTTCTGGTAGGTATTGATATCGGTTATTTGCCCGAGACTCTGGTCCTCAAGAGGTGGTGCAGAAACGCCAAGAACAATGTGACTTTCGTTAGACAAGTTACTGAAACGGGTGATGCTGCATCCCGGTACCACAGCAGACTTGGTGCATTTGTAGACCAATGTAAGCGTTTGGCTAAGGTGGCTTGTCTAAGGGAGGAGGACTACAAGGTATATAGCGAGAAAATGGCACGGGATGTTGTCATGTTGGAGGTCAAGAATGGGTTGCGTGTCGCCGCAGATGTTAATACACAGCCTAACGGTGAGGGCGGTGGTGGGATAAATGATCCAGTCCGCGTCCGAACAAAAGGCACCGGTAGAGGAAACGTTTCTCAGCGAACCAAGGGACCGAAGAAGAGAAAATGCAGCGCCTGCGGAAAACTGGGTCATCGCCGAACTCGCTGCCCCATTGGGGCAGACCTGCGCCCGGGATGTCGTGGATCGCAACGGGTTCCCAAGGGTCGGCAAGCTGAAGCTCAGGCGACACCGTCACAGACGACTAGACCAGATCACTTGAACTGTTTTGCCTCTGAACTTGCAACGGGTCAGCAGGAGCTCCAGATGGGGGCGGGCACGAGGAAGAGGAAACTAAGGGTTGAGCTTCCAAATACATTCCCGCAATTCATGGCAGGACGTTTCCTCGCAAGGAAGGATGGAGATTTGGCAAGATATGTTGACCAGTACTCGGAGTGTCAACATATGCTGAGGAATGCACAATCACTCTGGGGCAATGCCTGA 2493 0.4765 MNNINQEAISTSANHESAVPEPEDGILNEETLFDMSMLGDEEGFPNMTQTKVEPESAQVPSHVSVEDVLKMEFFTPGEAREFYTSYSRLKGFAIRNSKTVKNAKGDIVRYNFVCNREGFRQKKWLDKPDRKREYKPIMRCGYVAEMRIKKNHGNGKWYVSQFVDDHNHTLLPERFIGYLPSHRNMSDVEIAQMNSMRQVGISIPKIYQSFAMQSGDVNAALRFFEHAARNDERLFWRYEVAAGSRMCDIIWSDGRSQEDYEAFGDVLAFDATYGRNKYNLPVIVLSGVNHHNQTCVFAAAMVSCESQDSYKWVLRRFLECMRGKAPKAFITDGDPSMRLAIMHVFPDAHHRLCAWHLLRNATAHVSQPRFTQLFKQCMLADIEVHEFERQWEAMVGECGVREVEWVMDLYSKKLSWATAYIRGRFFTGLRTTSRCESLHAKLGGFVESRYGILDFITNFQRCVDFLRDKEEELDFRSFYGTPVLQTHFQEIERSAATLYTREVFYRFRETLKRVVRFNIIDREDCENGCCYVIQKYRRPESTWQVLHQPQNGTFECNCHRMESYGIPCVHIIFVLVGIDIGYLPETLVLKRWCRNAKNNVTFVRQVTETGDAASRYHSRLGAFVDQCKRLAKVACLREEDYKVYSEKMARDVVMLEVKNGLRVAADVNTQPNGEGGGGINDPVRVRTKGTGRGNVSQRTKGPKKRKCSACGKLGHRRTRCPIGADLRPGCRGSQRVPKGRQAEAQATPSQTTRPDHLNCFASELATGQQELQMGAGTRKRKLRVELPNTFPQFMAGRFLARKDGDLARYVDQYSECQHMLRNAQSLWGNA 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00981 830 Pfam MULE transposase domain 266 360 IPR018289 -
Aip10g00981 830 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Aip10g00981 830 MobiDBLite consensus disorder prediction 668 708 - -
Aip10g00981 830 ProSiteProfiles Zinc finger CCHC-type profile. 705 721 IPR001878 GO:0003676|GO:0008270
Aip10g00981 830 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 203 IPR031052 GO:0006355
Aip10g00981 830 PANTHER OS02G0262500 PROTEIN 209 680 - -
Aip10g00981 830 PANTHER OS02G0262500 PROTEIN 67 203 - -
Aip10g00981 830 MobiDBLite consensus disorder prediction 730 752 - -
Aip10g00981 830 MobiDBLite consensus disorder prediction 1 22 - -
Aip10g00981 830 MobiDBLite consensus disorder prediction 1 17 - -
Aip10g00981 830 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 209 680 IPR031052 GO:0006355
Aip10g00981 830 Pfam FAR1 DNA-binding domain 81 172 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00981 Aip-Chr10 12465708 12469375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00981 MULE 3.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00981 - - ahf:112785456 1639.78