Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00978 ATGACCGGTGCAGTTGGGGCTAATCTAATTCTTGAAATGAGGTTATCCGTCAACACCCTTTCCATTAGTATGGAAAATACAGACTACAATCAGCAACAGTGGCAGCACAATGTTGAAGCTTTCTCTTTAGCTGGAAGTGTTGCTAGTAAGGATTCTGAAGTAGAAATTGGTTTCTTAAGAAATACAGAGAAACACATAGAAAGAAAAGAAAAGAAAGGACTAATAAGCAATGATCAAGAAGATGAAGATTACATTTTGGCTGAAGCAAGGCAACCATTGTGGCGAAAAGTGCCGGTACCTTCAAGCCTAATCAATCCATACCGGATAGTCATTGTCATGCGCCTCGTCGTGCTGGCATTCTTTTTTCGCTTCCGGATCCTAAATCCAGTCCATGATGCATTTCCACTCTGGTTGGTCTCAGTAATTTGTGAAATATGGCTAGCATTGTCCTGGCTAGTTGATCAGCTACCAAAATGGTTCCCCATCACACGCAAAACCAGCCTCGAGCGCTTGTCCTTGCGCTTCGAGCAAGAAGGCAGGCAAAACAAACTATCCCCTGTTGATGTTTTTGTGACAACTGCAGACCCTTTTAAAGAACCACCAATCATAACAGCAAACACTGTCTTATCAGTACTTTCTGTTGATTATCCAGTAGAAAAGGTTAACTGCTATGTCTCGGATTACAGTGCTTCAATGCTTCTCTATGATACTTTGTATGAAACTTCAGAGTTTGCAAGAATTTGGATCCCTTTTGTGAATAAGTACAGCATTGAGCCAAGAGCACCTGAATTCTATTTCTCTCAGAAGGTTGATTACTTGAAAGACAAGGTTCATCCTACATTTGTAAGGGACCGCAGGGCGATGAAGAGAGAGTATGAAGAGTTTAAGGTGAGAATCAATGTGTTGATTTCAAAGGCTCAGAAGAAACCAGAAGAGGGTTGGGTGATGAAAGATGGAACACCTTGGCCTGGGAACAACACTGAAGATCATCCAGGGATGATTCAGGTGTGTTTGGGAAGTGCTGGTACACTGGACATGGATGGCAAACAACTGCCACGGCTTGTGTATGTTTCGAGGGAGAAGCGCCCCGGCTATCGACACCACGAGAAAGCTGGTGCTATGAATGCTTTGGTTCGAGTTTCTGCTGTTCTTAGCAATGCTCCTTTTGTGTTGAACTTGGATTGTGACCAGTATATCAATAATAGCAAGACTATAAGGGAGGCTATGTGCTTCTTAATGGATCCTCAGCTTGGAAAGAGGATTTGTTTTGTCCAATTTCCAAGAAGGTTCGATGGCATCGATAACAATGATTGA 1314 0.4262 MTGAVGANLILEMRLSVNTLSISMENTDYNQQQWQHNVEAFSLAGSVASKDSEVEIGFLRNTEKHIERKEKKGLISNDQEDEDYILAEARQPLWRKVPVPSSLINPYRIVIVMRLVVLAFFFRFRILNPVHDAFPLWLVSVICEIWLALSWLVDQLPKWFPITRKTSLERLSLRFEQEGRQNKLSPVDVFVTTADPFKEPPIITANTVLSVLSVDYPVEKVNCYVSDYSASMLLYDTLYETSEFARIWIPFVNKYSIEPRAPEFYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVRINVLISKAQKKPEEGWVMKDGTPWPGNNTEDHPGMIQVCLGSAGTLDMDGKQLPRLVYVSREKRPGYRHHEKAGAMNALVRVSAVLSNAPFVLNLDCDQYINNSKTIREAMCFLMDPQLGKRICFVQFPRRFDGIDNND 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00978 437 Pfam Cellulose synthase 187 437 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip10g00978 437 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 16 437 - -
Aip10g00978 437 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00978 Aip-Chr10 12362522 12374304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00978 78 437 Cell Wall Biosynthesis AT5G17420 71.389 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00978 K10999 - gmx:100777278 675.626