Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00970 ATGGAAGAAACATTTGTTCCCTTTCGCGGGATCAAGAATGATCTCAAAGGAAGAATTCTCTGCTATAAGCAAGATTGGACCAGTGGATTCAAGGCAGGCATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCATCAGCTATTCCTGTTATCTCTTTTGGGGAGCAATTAGAGAGAAATACTGATGGAACTCTAACTGCAGTGCAGACCCTAACATCGACTGCGCTATGTGGCATTGTCCATGCAATCCTTGGAGGGCAACCTCTCCTCATACTAGGTGTAGCTGAGCCAACTGTTCTGATGTATACATTCCTATACGATTTTGCAAAGGATAGAAAAGATTTGGGGCAAAGGCTGTTCCTCGCTTGGGCTGGATGGGTATGTGTTTGGACTGCCTTATTGCTGTTTTTGTTGGCCATCCTTGGTGCATGCTCTATTATTAACAGATTCACACGCCTTGCTGGTGAACTATTCGGTCTGTTGATCGCAATGCTCTTCATGCAGCAGGCCATAAGGGGGCTAGTGGAGGAGTTTGGTGTACCACACCAAAGAGAAGGTATCAATCAGATTGCACACCAATCCTCTTGGCTGTTTGGGAATGGAATGTTCGCCTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCATTAAGAAGTCGTAAAGCTAGATCGTGGCGTTATGGCACAGGTTGCTTGAGGGGATTTATAGCTGATTATGGAGTTCCTCTTATGGTTCTTATGTGGACTGCTGTGTCTTACATACCAGCCAATAATGTTCCAAGGGGAATCCCAAGGCGGCTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTAATCAAGGATATGTTGAATGTGCCTCTTATTTATATAATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCCCAACTTGCTCAGCAGAAGGAATTTAATTTAAGAAGACCCTCTTCTTATCATTATGATCTTCTTCTCTTAGGCTTATTAGAACTATGGAGAATGCTCTACGGGCCATATAGAGTAAACTTGAAGTTTTTCATGTCATCAAAGGCACCTGATGTATCAAAGCTAGTTTTCGGAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGATATTGCTTTTCGAGGCAAAAAACGAGAGCGGGCCTTTACGAATAGAGGACGCCGGAATCAGTTGCGCTCAATGGGAGAAGCTAAGAATTTGCTTCAATATGTGTTCAATTCAGTCGCAGATGTTAGAATGCCAAATGCCAAATGCCACGGCTGCAGTTAACCCTGTTCAAGCCACAGGAAAAGAACCAATCCTCGAGTTGTTCATGCATGACATTCTTGGTGGGACTCCCATTCCCAACGCCAACGGTGCTCTTCCCACTGTTAATGGCGTTTTTGGTACTCCCTCGGCACCGGCTTGGCTGGCACCACCTTTGCGGCAAATGTTACAGTTAGGACCTGATGGGTTGGGACTTGGTTTCGGCACAATAACTGTGATCGATGACGTTTTGACGGTGCAACCAGAGTTGGGATCGCAGATAGTTGGGAAGGCTCAGGGGGTTTATGTTGCAAGTTCAGCAGATGGGAGCCGGCAAATGATGGCATTCACAGCACTGTTTGAAGGAGGGGAGTACGGTGACAGCTTAAACTTGTACGGACTGTTCAAGATTGGGAGCGCCATGTCGAAGTTATCGGTGATCAGTGGGACTGGGAAGTTCAAGAATGCTAAGGGCTTTGCGGAGGTTAGGAGTCTCATACCACCAGGGCAGATTGCCACTAATGGTGCTGAGACATTGCTGAGGATCACTGTCCATTTGAAATACTAA 1869 0.4505 MEETFVPFRGIKNDLKGRILCYKQDWTSGFKAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLTSTALCGIVHAILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGQRLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPHQREGINQIAHQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGTGCLRGFIADYGVPLMVLMWTAVSYIPANNVPRGIPRRLFSPNPWSPGAYSNWTVIKDMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRRPSSYHYDLLLLGLLELWRMLYGPYRVNLKFFMSSKAPDVSKLVFGSKLPILSDEKLSLKILLFEAKNESGPLRIEDAGISCAQWEKLRICFNMCSIQSQMLECQMPNATAAVNPVQATGKEPILELFMHDILGGTPIPNANGALPTVNGVFGTPSAPAWLAPPLRQMLQLGPDGLGLGFGTITVIDDVLTVQPELGSQIVGKAQGVYVASSADGSRQMMAFTALFEGGEYGDSLNLYGLFKIGSAMSKLSVISGTGKFKNAKGFAEVRSLIPPGQIATNGAETLLRITVHLKY 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00970 622 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Aip10g00970 622 Pfam HCO3- transporter family 203 348 IPR011531 GO:0006820|GO:0016021
Aip10g00970 622 Gene3D - 494 612 IPR044859 -
Aip10g00970 622 PANTHER ANION EXCHANGE PROTEIN 1 345 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aip10g00970 622 Gene3D Helical hairpin bin 18 60 - -
Aip10g00970 622 PANTHER BORON TRANSPORTER 2-RELATED 1 345 - -
Aip10g00970 622 Pfam Dirigent-like protein 453 619 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00970 Aip-Chr10 12071069 12080105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00970 1 336 Antiporters AT3G62270 80.952 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00970 K24194 - gmx:100782542 632.869