Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00962 ATGGCAGAGTTTGCAAAGGAGAATTTGTTCGACAATGTTAAGCAACTAGATAATAACACCTACCGAGTTTGCTTCAAAGCTCCACCCAGGATTGTTTCAGATGGCATTTGGGGTGGCCAAAAAAATGGCAGGAAACCGATGAAATCCTTTCTGCCATTGTTTGAGTTGCAAGTGCTTATAATTTTTGTCGTGACACAAATCTGCCACTTTTTTTTCAAGCGATTGCGACTCCCTTTTCTTGTTTCCCAAATCATGGCTGGCATTATTATAGGAATTTCAATTCAAGAAGAGCCAACACGTGATTTGATGGCGAAGTTGTTTCCATTTGGAAGTCACGACGTTATTTCTACAATATCATCAATTGGTTTTGTTCTTTTCATCTTCATAAACGGAGTTGAAATGGATTTCTCCATGATAACAAGGACAGGGAAAAAGGCATGGACACTGGCGACAATTGGATTAGTACTACCAACAATGATTGGTTACCCACTTCTACAATACATCCTCACTAAAAAACCAGATCTTAATTCAATGAGAACAGATCTCATGGTTTCATCCGCATTGCACAATCTGGTTTCATTTGCAGTCATTTACAAAACCCTCAACGGGCTCCAAATGCAAAACTCGGAACTCGGAAGATTGGCATTGTCCACAGCATTGTCAAGTGACATACTAAGCACCACGATGGCATGCGTCATCAAGGCTGGAATGGCAAATGGGACAAAGGCTAAGATGTTAAACTCGCTCTACTTGATCGCCTTTGTTACCCTTATTCCGTTGGTTTTTCGACCAATAATGTTTTGGGTCATAAAAAACACGCCAGAAGGAAGGCCAGTGAGCAATGGTGTTGTTTACCTCATCATCTTAATGGTCTTTGGTTTGGGATGGATTTCGATCAATATAAATCAAGATTTTCTACTTGGAGCTTTCATATTAGGCTTAGCTGTGCCCGAAGGGCCTCCTTTAGGATCAACATTGGTCAAGAAGCTTCGATTTTTTGGCAACTGGTTCTTTCTGCCAATCTTTGTGGCCACATGCACTATGAAGGCTGATTTTTCATTTAATCACCGACCAAATGTGGTTATAGCTACATCTCTTGTGGCACTACTAACCCACGTTGTGAAAACACTCGCAATCTTTTTACCTGCCTTGTGGTGCAAACTTCCCGTGAGCGATGCTTTGTCTCTCGCCCTTATTTTGAATAGCAAAGGAGAAATGGAAGTTGGATTGTCCAGCTCCCAGTTTGATAATAAGATGATTGGTGGGCACACATATGGAACAATGATGATAAGCATAATGGTGACAGCAAGCATTGTTCAATGGTCTGTAAAGTCCCTGTATGATCCTTCAAGAAAATATGCTGGCTACCAAAAAAGAAACCTGATGGACATGAAACCCGATTCTGAATTGAGAGTACTCACCTGCATTCACAAAAAGAGCCACATAGTACCCATAACCAACGTCATTGACCTCTTTTTTCCATCACTAGAAAACCCAATGACGGTTGACGTCTTGCATCTAATAGAGCTCGTTGGTCGCTCCTTACCCGTCTTTGTCTCCCACCGTCACCAAAGGGTTAAATCAAGCCACAAGGCATACTCAGATGACGTCATCATCGCTTTCGACGTATATGAGCATGATAATGCAGGTGCCGTCATAGTCAACACTTATACTTCAATATCCCTACCAACCCTCATGCATGAAGACGTTTGCAACCTCGCGTTGGACAAAGTGGCATCCATGGTGATCCTTCCGTTTCATCAAAGATGGTCCATTGATGGCGCAATCGAATGCGATGACAAGAACATGAGGGCCTTAAATAACAAGGTCCTAGACATTGCTCCATGCACAGTTGGAATCCTAGTCAGCAGAGGTCAACACTCCATAAAAGAGTCACATACTCGATTGGCGGTTATTTATTTGGGTGGAACAGATGATGGAGAAGCCTTGTGCATAGCAAGACGAGCAATCAAGAACCCGAGGGTGCGCTTAGTTGTGTACAGACTTGTCCACACACACTATACGCCGCACTGTAACGACGACTTGGAAGATTTTATGGTCACGTGCAATGCCGTTGGAAATGTGTGCTGTACGGATGTTACAGTAGAGGAAGGATCCAAGACAGCATGTTTCTTGCGTGACATAGTGAATGAGCACGACTTGTTCATAGTTGGTAGAAGGCACGAGCTTGAGTTGCCTCAATTAGAGGGACTTACAAGTTGGAGCGAATTTCTAGAGTTAGGTGTCATCGGTGATTTTCTTGCCTCACCAGATTTCGGTAGTCGTGCATCTATTTTAGTCGTGCAACAACAAGTCTCCAAGACCTAA 2328 0.4287 MAEFAKENLFDNVKQLDNNTYRVCFKAPPRIVSDGIWGGQKNGRKPMKSFLPLFELQVLIIFVVTQICHFFFKRLRLPFLVSQIMAGIIIGISIQEEPTRDLMAKLFPFGSHDVISTISSIGFVLFIFINGVEMDFSMITRTGKKAWTLATIGLVLPTMIGYPLLQYILTKKPDLNSMRTDLMVSSALHNLVSFAVIYKTLNGLQMQNSELGRLALSTALSSDILSTTMACVIKAGMANGTKAKMLNSLYLIAFVTLIPLVFRPIMFWVIKNTPEGRPVSNGVVYLIILMVFGLGWISININQDFLLGAFILGLAVPEGPPLGSTLVKKLRFFGNWFFLPIFVATCTMKADFSFNHRPNVVIATSLVALLTHVVKTLAIFLPALWCKLPVSDALSLALILNSKGEMEVGLSSSQFDNKMIGGHTYGTMMISIMVTASIVQWSVKSLYDPSRKYAGYQKRNLMDMKPDSELRVLTCIHKKSHIVPITNVIDLFFPSLENPMTVDVLHLIELVGRSLPVFVSHRHQRVKSSHKAYSDDVIIAFDVYEHDNAGAVIVNTYTSISLPTLMHEDVCNLALDKVASMVILPFHQRWSIDGAIECDDKNMRALNNKVLDIAPCTVGILVSRGQHSIKESHTRLAVIYLGGTDDGEALCIARRAIKNPRVRLVVYRLVHTHYTPHCNDDLEDFMVTCNAVGNVCCTDVTVEEGSKTACFLRDIVNEHDLFIVGRRHELELPQLEGLTSWSEFLELGVIGDFLASPDFGSRASILVVQQQVSKT 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00962 775 Pfam Sodium/hydrogen exchanger family 59 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip10g00962 775 Gene3D - 54 454 IPR038770 -
Aip10g00962 775 PANTHER CATION/H + ANTIPORTER 13 774 - -
Aip10g00962 775 PANTHER CATION/H+ EXCHANGER 3 13 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00962 Aip-Chr10 11956347 11960100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00962 11 771 Antiporter Super Family AT5G22900 35.115 4.19e-156 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00962 - - cam:101512648 857.44