Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00960 ATGGATAGTGCTGCTGGAGAGTTCCACGTGAGTGTGACCAATGAAGAGGTGGTAGCAGCGGTTCTACCAACTCAAGAACACTGGCTACCACTCTCTAACCTCGATCTACTCCTTCCTCCGGTAGACGTTGGAGTCTTCTTCTGCTACAAGAACAACAACACAATGGTGATGAATAGCTTTGCATCCATGGTGGGGTGTTTGAAGAAATCGCTGTCTCAAGCTCTTGTGTCTTACTATGCATTTGCCGGCGAAGTGGTGGCCAACACGGCGGGTGAACCCGAGTTGCTATGCAACAACCGTGGAGTTGATTTTGTTGAAGCTGTCGCAGACATTGAGCTTCACTGTCTCAACTTGTACAATCCTGATGTCTCCATTGAAGGGAAGCTTGTTCCCAAGAAGAAGCGTGGCGTGTTTGTGGTCCAGGCAACATCACTCAAGTGCGGTGGGATAGTAGTGGGATGCACATTTGATCATCGAATAGCAGATGCATACTCAGCAAACATGTTCCTTGTATCATGGGCCAACATGGCCCAACCCACCAGGCCCAAGCCCAAGCAACCTTGCTTCCGTCGCTCCCTTCTCAGTCCCCGCCGCCCAGGGTTCATCCACCCCTCCCTCCACAACATGTACATCCCCATCTCCAAGCTCCCACCACCAGCTGCCACCACCACCTCTCTCCTCAGCCGCATTTACTATGTCACGGCAAAGCAGCTCCAACACATGCATTCACTCGCCACCGACAATGGCGCCACCAAGCACACAAAACTCGAGTCATTCTCCGCGTTCTTGTGGAAGATGGTTGCTCGTGCAGCTTCAACAGACATCAAAGGCAAAAAGGTTGTTGCCAAAATGGGCATAGTGGTGGATGGAAGGAAGAGGCTAGCCGATAGTGGTGGTAGCAGTTGTGATGGAGAAAAAGGGAAAAAATCACTGATGAATTCTTATTTTGGAAATGTGCTTTCCATACCCTTTGGTCAAAAACTGGTGGAGGAGCTGGTGGAGAAACCATTATGGTGGGTGGCAAATGTGGTTCATGAGTTTTTGGAGGTGGCAGTAACAGAGGAGCACTTTCTAGGACTTATTGACTGGGTGGAAACACACCGGCCGGTTCCTGGGTTGGCGAAGATCTATTGCAGTGGCGCCGAGGAGGGGCCGGCTTTCGTTATATCGTCTGGACAAAGGTTCCCGGAGGAGAAGGTGGATTTTGGGTGGGGGAAGGCTGTGTTTGGTTCTTATCATTTTCCTTGGGGTGGAGATGCTGGCTATGTGATGCCAATGCCAAGTCCTCTTGTGAATGGTGATTGGGTTGTTTACATGCACCTTGTGAAGGAACAATTATACACAATTGAGTCTGAGGCTTCTCATTTCTTTATGCCTTTAACTTGGGAGTACCTTAACCAATGA 1404 0.4986 MDSAAGEFHVSVTNEEVVAAVLPTQEHWLPLSNLDLLLPPVDVGVFFCYKNNNTMVMNSFASMVGCLKKSLSQALVSYYAFAGEVVANTAGEPELLCNNRGVDFVEAVADIELHCLNLYNPDVSIEGKLVPKKKRGVFVVQATSLKCGGIVVGCTFDHRIADAYSANMFLVSWANMAQPTRPKPKQPCFRRSLLSPRRPGFIHPSLHNMYIPISKLPPPAATTTSLLSRIYYVTAKQLQHMHSLATDNGATKHTKLESFSAFLWKMVARAASTDIKGKKVVAKMGIVVDGRKRLADSGGSSCDGEKGKKSLMNSYFGNVLSIPFGQKLVEELVEKPLWWVANVVHEFLEVAVTEEHFLGLIDWVETHRPVPGLAKIYCSGAEEGPAFVISSGQRFPEEKVDFGWGKAVFGSYHFPWGGDAGYVMPMPSPLVNGDWVVYMHLVKEQLYTIESEASHFFMPLTWEYLNQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00960 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 462 - -
Aip10g00960 467 Pfam Transferase family 8 455 - -
Aip10g00960 467 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 462 - -
Aip10g00960 467 Gene3D - 9 209 IPR023213 -
Aip10g00960 467 Gene3D - 218 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00960 Aip-Chr10 11852689 11860630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00960 32 450 Monolignol Biosynthesis Gene Families AT5G48930 27.064 6.71e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00960 - - gmx:100785067 659.833