Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00951 ATGTATGCAAACAAGTTTTGTGGTGTCATCCCATGGAACTTGGTGTGTAACACTATCAGAGCTTCGACTAGACAGAAATTTCTTCTATGGGAGTCTACCCCATTCCTGGGATCTTTAAGATCCCTTGAAAGGAAGAAGTCCAAGAAGTTATCTTTTTCACCATCACTAAAACATAGATACTTAAAGGTTTCCTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGTTGACACGGGAAGCTCTGGCTCTGTGTATAGAGAAACCCTTGTCTATTTTGAGAGACCTGTTGCTGTGAAAGTGTTGAATCTTCAAACAGGTGGGGCATCGAAGAGTTTCATGGCCGAATGTAAAGCTCTAGGAATAATTAAACACAGAAACCTTCTTAGCCTATTGGCTTCTTGTTCAAGTGTTAACTACAAAGAGAATGATTTTAAGGCCATAGTGTTTGAGTTCATGTCTAATAGGAGCCTAAAAACTTTGTTGTACAACACTATTGAAGATAGCGAGTCCACAAATCTGAGTCTGAACCTTATGCAAAGGGTAAATATTGCTCTTGATATAGCTTTTGCATTGGATTATATTCACAATGATTCAGGAGTTGTAATTCATTGTGATATTAAGCCTAGCAATATGCTTCTTGATGATGATATTGTTGCCCGCTTGGGAGACTTTGGTCTAGCTAGACTTATTTCAAGGGGACAGAAGCTATTCTACCAGTAA 735 0.3837 MYANKFCGVIPWNLVCNTIRASTRQKFLLWESTPFLGSLRSLERKKSKKLSFSPSLKHRYLKVSYGELHQATNGFSSSNLVDTGSSGSVYRETLVYFERPVAVKVLNLQTGGASKSFMAECKALGIIKHRNLLSLLASCSSVNYKENDFKAIVFEFMSNRSLKTLLYNTIEDSESTNLSLNLMQRVNIALDIAFALDYIHNDSGVVIHCDIKPSNMLLDDDIVARLGDFGLARLISRGQKLFYQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00951 244 SMART serkin_6 75 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00951 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Aip10g00951 244 ProSiteProfiles Protein kinase domain profile. 75 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00951 244 PANTHER LRR RECEPTOR-LIKE KINASE 42 236 - -
Aip10g00951 244 Gene3D Phosphorylase Kinase; domain 1 37 156 - -
Aip10g00951 244 Gene3D Transferase(Phosphotransferase) domain 1 157 241 - -
Aip10g00951 244 Pfam Protein kinase domain 81 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00951 244 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 42 236 - -
Aip10g00951 244 SUPERFAMILY Protein kinase-like (PK-like) 50 240 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00951 Aip-Chr10 11641220 11642273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00951 43 235 Receptor kinase-like Gene Family AT3G47570 50.254 1.48e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip10g00951 Pkinase 9.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00951 - - aip:107620136 388.267