Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00950 ATGTCTAATGGGAGCCTAGAAACTTTGTTGCACAACACTATTGAAGATAGCGAGTTCACAAATATGAGTCTGAACCTTATGCAAAGGGTAAATATTGCTCTTGATGTAACTTTTGTGTTGGATTATATTCATAATGATTCAGGAGAAGCCGTAATTCATTGTGATATTAAGCCTGGCAATGTGCTTCTTGATGATGATATTGTTTTCCACTTGGGAGACTTTGGTCTAACTAGACTTGTTCAGTTGTTCAAGGGGACAAAAACTATTCTACTAGTAATCATGGTAGTTCCTCTATAA 297 0.3603 MSNGSLETLLHNTIEDSEFTNMSLNLMQRVNIALDVTFVLDYIHNDSGEAVIHCDIKPGNVLLDDDIVFHLGDFGLTRLVQLFKGTKTILLVIMVVPL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00950 98 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 85 - -
Aip10g00950 98 SUPERFAMILY Protein kinase-like (PK-like) 1 86 IPR011009 -
Aip10g00950 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00950 98 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Aip10g00950 98 Pfam Protein kinase domain 2 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00950 98 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Aip10g00950 98 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00950 Aip-Chr10 11639250 11639546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00950 1 83 Receptor kinase-like Gene Family AT3G47570 50.000 1.77e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip10g00950 Pkinase 8.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00950 - - ahf:114924118 196.438