Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00937 ATGCCTACACAAGCTATGTGGCGTATACGAAGGATATTGGTTTTGCCGTGCGAAAGGGAGATTCTGTTAAAGACTAGGGGGGATATTGTCAGAAAGTTTTTCTATTGCAATCAGCAAGGGCTGCAGGAAAAGAAGCACTATGAGAGGGTTGACAGAAAAAGGCCATATAAACCAGAGACGAGAACAAATTGCAATGCCAAGCTTGTTGTGTTTCTGGACAAAAGTTGTGGGAAGTGGAGGACAAAGGCATTAGTTGAAGAGCATAATCATGACTTGGCATCCCCAACATTCACTAATGTAATAACACTGCATAGGAAGATCACAGAAGGTCACAAAGCGCATATACATAGCATGCATGAAGCCGGTTTCCAGACAACTCAAATGATGGGCTTCTTTGCCTATATGTGTGGTGGATATCGCAATCTTAACTTCATAAGTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCTAGGATCGTGGAGAGAGATGCAGCCGCAGAAATAAACTACTTGAAGGCAAGGCTGAGTTGGATCCAATGGCAGTTATGCAATATACGTATTGCGCTGAGAAGCACCTTGGTCACATGTTTTGATCTGATGGATCCGAAAGTGATTGTCACAGATGGTGATGAATCCATGCGAGAGGCCATTCGAAGTGAATTTTCGAACGCAGCACATCGACTATGCACCTGGCATCTTGCTCGAAATGCTATTGTGAATATCAAGGACAAAAATTTTTGTGCTACGTTTGAGACTGCTATTGATCACTACGGGTCTCGAAACCTTGGAAAGATCTGCGAGCAAGTTCTACATGAGGGAGATATTCTACGAGGTGCAAAAACAAATCGAGGGGGGTTGCGGCATTGTTGGTCTTACACAGGGACAGTTTTGGTAGCACCAAGAAGTTCATGTTTAGAAAGTTTTAAAGGCCCCATCATGTGTACTCGGTATTCTTGGATAGAAGTTCTGATAAGTATGCATGCTCTTTGCAAAGATGCAAAAGTAGCCGGCAGCAACAGTAAGGATGCGGCATCGGATCCCACGGGAGGATTTTGCGTTAGATACGGAGCATTGTGGAGTGCTTTCCTATCGATGTGTTTTCAAGATGCGCAAACTACAGAAACATACAACACTCCTATGACGGAAGTTGCCCGAATGTCAAGGGAGTTTGAATCTATTTGTGGCATAGGACAAAGTGTGCATCGTGTTCAAGCAGGGGTGGATCAAATCCACATTCGTTACCCAAAGGTTATCAGGTCGAAGGGTGCACCTCGCGGGAGCATGAATGGCAATAACGGGAGGCATTACCAGAGGTGCTTCAGATTAGGCCATGATTGA 1344 0.442 MPTQAMWRIRRILVLPCEREILLKTRGDIVRKFFYCNQQGLQEKKHYERVDRKRPYKPETRTNCNAKLVVFLDKSCGKWRTKALVEEHNHDLASPTFTNVITLHRKITEGHKAHIHSMHEAGFQTTQMMGFFAYMCGGYRNLNFISKDLYNYMDGVRQSRIVERDAAAEINYLKARLSWIQWQLCNIRIALRSTLVTCFDLMDPKVIVTDGDESMREAIRSEFSNAAHRLCTWHLARNAIVNIKDKNFCATFETAIDHYGSRNLGKICEQVLHEGDILRGAKTNRGGLRHCWSYTGTVLVAPRSSCLESFKGPIMCTRYSWIEVLISMHALCKDAKVAGSNSKDAASDPTGGFCVRYGALWSAFLSMCFQDAQTTETYNTPMTEVARMSREFESICGIGQSVHRVQAGVDQIHIRYPKVIRSKGAPRGSMNGNNGRHYQRCFRLGHD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00937 447 Pfam MULE transposase domain 193 238 IPR018289 -
Aip10g00937 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 176 IPR031052 GO:0006355
Aip10g00937 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 196 245 IPR031052 GO:0006355
Aip10g00937 447 Pfam FAR1 DNA-binding domain 24 93 IPR004330 -
Aip10g00937 447 PANTHER OS02G0262500 PROTEIN 47 176 - -
Aip10g00937 447 PANTHER OS02G0262500 PROTEIN 196 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00937 Aip-Chr10 11403001 11404973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g00937 FAR1 4.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00937 - - aip:107610720 328.946