Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00929 ATGGAGAGGAACAATTTGAGTAGTTCATATGATCCTCATCACATAGTGAAGGAGTGTGAGAAGAAGAAGAAGGATCATGATCATTTAGGAGGTTCATCAAGGAACATGTCTTTCAATCTGAGGAATGTTTCAAAGCTCATTCTTCCACCACTCGGAGTTTCTTCCAACAATCAGAACCATGTTGAATCAAGAGCCTGGATCATATCACCAATGGATTCAAGATACAGGTGTTGGGAGAGTTTTATGGTTGTTCTGGTAGCATACTCTGCATGGGTGTATCCATTTGAAGTAGCATTCATGCACTCATCTCCAGAATACAGGAGAATCTACATTGTTGACACTGTTGTTGACCTTTTCTTTGCCGTTGACATTGTGTTGACCTTCTTCTTGGCCTACATAGATCGAACTACTCATCTATTAGTTCAGGACTCCACAAAGATTGCACTCAGGTACTTGTCAACATGGTTGGTAATGGATGTGGCATCAACGATCCCTTACGAGGCACTCTCTTGCTTGTTTACCGGCAAACACTATGTCTCCCTCCCTTACTACCTCCTTGGCCTCCTCCGCTTTTGGCGTCTCCGCCGTGTCAAACAATTCTTCACAAGGCTTGAGAAAGACATAAGGTTCAGCTATTTCTGGATCCGATGTGCTAGACTTCTCTCTGTAACAGTATTTTCAGTTCATTGTGGTGGGTGCTTGTATTACATGCTGGCTGATAGGTACCCTCATAAAGGGAAGACATGGATTGGAGCAGTAAATCCAAACTTCAGAGAGACAAGCCTTTGGATCAGATACATCTCAGCCATGTATTGGTCTATCACCACCATGTCCACCGTTGGCTATGGCGATCTCCACGCTGTTAACACTGTCGAAATGATCTTCATCATTTTCTACATGCTCTTCAACCTCGGCCTAACTGCTTACTTGATTGGTAACATGACTAACCTTGTTGTCGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAATCAGCATCAAACTTTGTGTCCCGAAATCGATTGCCTCCGAGGTTAAAGGAGCAGATCCTGGCTTACATGTGTTTGAGATTCAAAGCTGAGAGTTTGAATCAGCATCACCTCATTGAGCAACTACCAAAATCAATTTGCCAGAGCATCTGCCAGCATTTGTTCTATGAAACTGCAGCAAAAGCTTATCTTTTCAAAGGTGTCTCAAAAGAAATTCTCTTGTCCTTGGTTGCGAAAATGAAGGCAGAGTACCTACCTCCTAGAGAGGATGTTATTATGCAAAACGAAGCGCCAGATGATGTTTACATCATAGTTTCTGGGGAAGTAGAGTTCATTGATTGTGTAATGGAGAAAGAGAGAGTCTTGGGGACTCTACAAACAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGCTGCAGACCTCAGAGCTTTACCTTTAGAACAAAGACTCTCACACAGCTTCTAAGGCTGAAAACTAATTTAATGGTGGAGAGTGTGGAAGAAGAGGATCCTGACATGGCTGTGAACTTGTTGACTGTGGCCACCACAGGCAATGCTGTTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCAGAAGGGAAAACCCCATTGCACATAGCAGCATCAAATGGGCATGAAGATTGTGTTAAAGTTTTACTTAAGCATGCATGTAACTTACATTTGAGAGATATCAATGGTAACACAGCACTATGGGATGCTATAGCATCAAAGCATTACTCCATATTCAGAATCCTCTACCAGCTTGCTGCTCTCTCCGATCCACACACACCGGGTGATCTCTTATGCACAGCAGCAAAAAGAAATGATTTAGTAGTGATGAAGGAGCTCTTAAAGCTAGGATTGAACATTAACTCCAATGATCACCAAGGAATGTCAGCAATCCAAATTGCCATGCAAGAAAACCATGTGGACATGGTTGAATTGCTTGTCATGAATGGAGCAGATGCCAATGGTGTATGTACTAATGGATTTTCTGCATTAGCCTTAAATGAAATGCTGCGAAAGCGCGAAGTTGGTCATCGAATCAATGTGAATGAGGCCATACCATGTGATTTTGTGTCAGAAGGGAAACACCAAGAAGATCAAAAGAAGAATAAGGGAAGTTCAAATGGATTCAACTGCCCAAGAATAAGCATATATAGAGGTCACCCTATACAGAGAAGAGGAAAAGGTTCCATGGAACCTGGGAAGTTAATAAGGTTACCTGATTCATTAGAGGATCTCAAAACTATTGCAGGTAAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTAACTGATGAAGAAGGAGCTGAGATAGACTGTATTGATGTCATCAGAGATAATGATAAGATTTTTGTTGTTTTATAG 2385 0.4193 MERNNLSSSYDPHHIVKECEKKKKDHDHLGGSSRNMSFNLRNVSKLILPPLGVSSNNQNHVESRAWIISPMDSRYRCWESFMVVLVAYSAWVYPFEVAFMHSSPEYRRIYIVDTVVDLFFAVDIVLTFFLAYIDRTTHLLVQDSTKIALRYLSTWLVMDVASTIPYEALSCLFTGKHYVSLPYYLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLSVTVFSVHCGGCLYYMLADRYPHKGKTWIGAVNPNFRETSLWIRYISAMYWSITTMSTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVSRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFYETAAKAYLFKGVSKEILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEFIDCVMEKERVLGTLQTGDMFGEVGALCCRPQSFTFRTKTLTQLLRLKTNLMVESVEEEDPDMAVNLLTVATTGNAVFLEELLRAGLDPDIGDSEGKTPLHIAASNGHEDCVKVLLKHACNLHLRDINGNTALWDAIASKHYSIFRILYQLAALSDPHTPGDLLCTAAKRNDLVVMKELLKLGLNINSNDHQGMSAIQIAMQENHVDMVELLVMNGADANGVCTNGFSALALNEMLRKREVGHRINVNEAIPCDFVSEGKHQEDQKKNKGSSNGFNCPRISIYRGHPIQRRGKGSMEPGKLIRLPDSLEDLKTIAGKKFGFDAKDAMVTDEEGAEIDCIDVIRDNDKIFVVL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00929 794 ProSiteProfiles Ankyrin repeat profile. 634 662 IPR002110 GO:0005515
Aip10g00929 794 SMART cnmp_10 396 513 IPR000595 -
Aip10g00929 794 Gene3D - 603 683 IPR036770 -
Aip10g00929 794 Gene3D - 513 602 IPR036770 -
Aip10g00929 794 CDD CAP_ED 396 510 IPR000595 -
Aip10g00929 794 Pfam Ankyrin repeats (many copies) 605 655 IPR002110 GO:0005515
Aip10g00929 794 ProSiteProfiles Ankyrin repeat region circular profile. 537 568 - -
Aip10g00929 794 PANTHER POTASSIUM CHANNEL AKT1 18 498 IPR045319 GO:0005249|GO:0006813
Aip10g00929 794 Gene3D Jelly Rolls 361 512 IPR014710 -
Aip10g00929 794 SUPERFAMILY cAMP-binding domain-like 323 500 IPR018490 -
Aip10g00929 794 Pfam Cyclic nucleotide-binding domain 416 492 IPR000595 -
Aip10g00929 794 PRINTS Ankyrin repeat signature 650 664 IPR002110 GO:0005515
Aip10g00929 794 PRINTS Ankyrin repeat signature 538 553 IPR002110 GO:0005515
Aip10g00929 794 Gene3D - 76 319 - -
Aip10g00929 794 ProSiteProfiles Ankyrin repeat profile. 537 569 IPR002110 GO:0005515
Aip10g00929 794 ProSiteProfiles Ankyrin repeat region circular profile. 634 662 - -
Aip10g00929 794 MobiDBLite consensus disorder prediction 700 720 - -
Aip10g00929 794 SMART ANK_2a 634 663 IPR002110 GO:0005515
Aip10g00929 794 SMART ANK_2a 537 566 IPR002110 GO:0005515
Aip10g00929 794 SMART ANK_2a 605 630 IPR002110 GO:0005515
Aip10g00929 794 SMART ANK_2a 570 601 IPR002110 GO:0005515
Aip10g00929 794 SMART ANK_2a 504 533 IPR002110 GO:0005515
Aip10g00929 794 Pfam Ankyrin repeats (3 copies) 516 592 IPR002110 GO:0005515
Aip10g00929 794 Pfam KHA, dimerisation domain of potassium ion channel 721 792 IPR021789 -
Aip10g00929 794 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 18 498 - -
Aip10g00929 794 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 499 793 - -
Aip10g00929 794 PANTHER POTASSIUM CHANNEL AKT1 499 793 IPR045319 GO:0005249|GO:0006813
Aip10g00929 794 SUPERFAMILY Ankyrin repeat 502 674 IPR036770 -
Aip10g00929 794 PRINTS EAG/ELK/ERG potassium channel family signature 266 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00929 794 PRINTS EAG/ELK/ERG potassium channel family signature 310 319 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00929 794 PRINTS EAG/ELK/ERG potassium channel family signature 124 133 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00929 794 PRINTS EAG/ELK/ERG potassium channel family signature 292 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00929 794 PRINTS EAG/ELK/ERG potassium channel family signature 113 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip10g00929 794 ProSiteProfiles cAMP/cGMP binding motif profile. 396 489 IPR000595 -
Aip10g00929 794 Pfam Ion transport protein 76 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip10g00929 794 ProSiteProfiles KHA domain profile. 721 794 IPR021789 -
Aip10g00929 794 SUPERFAMILY Voltage-gated potassium channels 70 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00929 Aip-Chr10 11211004 11216434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00929 21 542 Ion Channels AT4G22200 67.908 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00929 K21867 - gmx:100798422 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00929 10 11211004 11216434 Aip10g00929 10 11211004 11216434 ECH