Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00916 atgCACCACCAGCACCAGCACCAGCACCAACACCACCACCAATCACCAACCAACAACAACGGCAACGCCGCTAACGATAACAACAACACCGTCGCGCTTTACGACGGTTCCTCTTCCGCCCTTAAGCCCTGCGGATTCCCCACCACCGACTCCGCCTCCGCCGCCAAGAAGAAGAGGGGCCGACCCCGGAAGTACTCCCCAGACGGCAACATTGCCTTGGGACTCTCTACCACCCACGCCTCTCCCTCTCCCGCAGCACCACCACGCGCCGATTCCTCTGCCGGAGGTTCTGGTGGCGGTGGCGCAACCCCCTCATCGGAGCCTCTGGCCAAGAAGCACAGAGGGAGGCCTCCTGGCTCCGGCAAGAAGCAGATGGATGCGCTTGGAGCTGGTGGGATAGGTTTTACTCCGCACGTGATCTTGGTGGAGTCTGGTGAGTATCTCAATATATTTGGGAAATGGAAGTGGCATGAAGGATTCATGTATTCATTGAGTGTTGATGTTGGTACCGTGTTATTGGATTGCCTCTTTCCATTTTAG 540 0.5685 MHHQHQHQHQHHHQSPTNNNGNAANDNNNTVALYDGSSSALKPCGFPTTDSASAAKKKRGRPRKYSPDGNIALGLSTTHASPSPAAPPRADSSAGGSGGGGATPSSEPLAKKHRGRPPGSGKKQMDALGAGGIGFTPHVILVESGEYLNIFGKWKWHEGFMYSLSVDVGTVLLDCLFPF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00916 179 MobiDBLite consensus disorder prediction 1 128 - -
Aip10g00916 179 SMART AT_hook_2 56 68 IPR017956 GO:0003677
Aip10g00916 179 SMART AT_hook_2 111 123 IPR017956 GO:0003677
Aip10g00916 179 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 147 IPR039605 GO:0003680
Aip10g00916 179 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 3 147 - -
Aip10g00916 179 MobiDBLite consensus disorder prediction 13 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00916 Aip-Chr10 11003996 11006312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00916 35 146 AT-hook Motif Nuclear Localized (AHL) Family AT5G46640 52.174 2.19e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00916 - - aip:107620117 232.261