Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00877 ATGGAGGTACAGGGTAAGCGCTTGAAGCCACGCCTCGATCGCCGCAACGCCATGAAGAACATCACTTACAAAGTCTCCTCTTCTTTCACCCCTTCCTCCATTGACCTTCCTCCTTCTTTGAACCACCAAAAAAGCTTCAGGGTCAAGGGCATCGACGACGGCGAGTTTGACCTCATCTTCCGCACCCTCGGTCTCTCTGGACCCGAAGACTTTTCTATTCCAACCGCAGCTTGGGAAAAAGCCCAAAGGTCTCGCCTTTCTCCTTCCCCTGTCACCACCAAGAACATCATCAACCTCCAGGTTGTTGATGAAGCACATGAACACCAAGCCCCACTTCCAATTCCACCTAAAACTGAATCTGGGGTTGGCTTCAATGTCGATGTTAGGCTGAAAAATCTAAGCTTTCAGCAACTTGATGGTGGGGGCATCAAGGGTGTTAGGCCTCCACCGGTGATGTTGCGGCCACCATTTGATGATGATGACAATGATGTTGATGTTGTGGATTCACCTTCGAGGGAACAAGATGAAAGGTACTTTGAAGAGAGTGGGGACCTTGATGTTTCTGATGATGATGATAGTGATGTTGCTAGTGGTGAGGTTTCCGATGATGTTGTTGGCGAGTCAAATGTTCATAACGTGTCTCCAAATGGTTCTTTTAGGAGAACGTTTATGTCGTGGCAAAAGGGCGAGATTCTTGGTAAAGGCTCATTTGGAACGGTTTATGAAGGCTTTACCGATGATGGATTCTTTTTTGCGGTGAAGGAGGTATCTTTGTTGGATGAAGGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAACAGGAAATATATCTTCTGAGTCAATTTGAACATGAGAACATAGTTAGATATCTTGGCACAGACAAGGACAATAACATGCTATACATCTTTCTCGAGCTTGTAACAAAAGGATCATTGGCAAGTCTTTATAGAAAGTATCGTTTAAAGGATTCTCAGGTTTCGGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAACGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGTGAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACTAAATTAAACGATGTTAAATCAAGCAAAGGTTCTCCATATTGGATGGCCCCTGAGGTTGTTAACTTACGAAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTGGAGATGTTAACACGGCAACCTCCTTATTCTCATTTAGAAGGAATGCAAGCGCTATTTCGGATTGGAAGGGGTGAAGCACCTCCAGTTCCTGAAACATTATCAAAAGATGCAAGAGATTTCATAATGAAATGCTTACAAGTGAATCCAAGTAAAAGGCCAACTGCTACTCAGCTGTTGGATCATCCATTTGTAAAGAGGCCACTTCTATCTCCCATAAGTCTTGTCTCTCCACGCATTAATCTTCTTCTGTCTTAA 1500 0.4393 MEVQGKRLKPRLDRRNAMKNITYKVSSSFTPSSIDLPPSLNHQKSFRVKGIDDGEFDLIFRTLGLSGPEDFSIPTAAWEKAQRSRLSPSPVTTKNIINLQVVDEAHEHQAPLPIPPKTESGVGFNVDVRLKNLSFQQLDGGGIKGVRPPPVMLRPPFDDDDNDVDVVDSPSREQDERYFEESGDLDVSDDDDSDVASGEVSDDVVGESNVHNVSPNGSFRRTFMSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDEGSQGKQSIFQLQQEIYLLSQFEHENIVRYLGTDKDNNMLYIFLELVTKGSLASLYRKYRLKDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEAPPVPETLSKDARDFIMKCLQVNPSKRPTATQLLDHPFVKRPLLSPISLVSPRINLLLS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00877 499 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 140 481 - -
Aip10g00877 499 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 97 - -
Aip10g00877 499 ProSiteProfiles Protein kinase domain profile. 226 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00877 499 MobiDBLite consensus disorder prediction 167 181 - -
Aip10g00877 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Aip10g00877 499 MobiDBLite consensus disorder prediction 144 211 - -
Aip10g00877 499 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 5 97 - -
Aip10g00877 499 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 140 481 - -
Aip10g00877 499 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Aip10g00877 499 Gene3D Transferase(Phosphotransferase) domain 1 224 491 - -
Aip10g00877 499 PRINTS Tyrosine kinase catalytic domain signature 304 317 IPR001245 GO:0004672|GO:0006468
Aip10g00877 499 PRINTS Tyrosine kinase catalytic domain signature 339 357 IPR001245 GO:0004672|GO:0006468
Aip10g00877 499 PRINTS Tyrosine kinase catalytic domain signature 405 427 IPR001245 GO:0004672|GO:0006468
Aip10g00877 499 PRINTS Tyrosine kinase catalytic domain signature 448 470 IPR001245 GO:0004672|GO:0006468
Aip10g00877 499 MobiDBLite consensus disorder prediction 182 198 - -
Aip10g00877 499 SUPERFAMILY Protein kinase-like (PK-like) 226 488 IPR011009 -
Aip10g00877 499 SMART serkin_6 226 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00877 499 Pfam Protein kinase domain 227 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00877 Aip-Chr10 10625545 10628181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00877 11 83 MAP Kinase Kinase Kinase AT4G08500 35.632 2.90e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip10g00877 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00877 - K13414 gmx:100806902 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00877 10 10625545 10628181 Aip10g00877 10 10625545 10628181 ECH
Aip03g04658 03 130813323 130816046 Aip10g00877 10 10625545 10628181 PCT