Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00875 ATGAAAACTGATCTCTCTTTGCACATAGATGCCGAGCAAGAACAAGAAAACAAACAAGAGGACGATGTTGATGTTGATGTTGAGGAAGAAATGAAACAAACACAGCTGCAATTAGAAGCTGGAGAAATAGAAGAAGATGTTGTATCTTTGCAAGACAACAAGAACTATAAAACTAGAGAGGAGGAGGACCTGAATGTGTTACAAATGGAGATGGATCGCATCAAAGAGGAGAATAAAGCTCTGAGGAAACTGGTGGAACAAACTATGAAAGACTACTATGATCTCCAAATGAAAATTTCCAACAATTATAATAACAAACACATCAAGGATCTTGAAATTTCTGTCCAAAGGGCATCACCGACAATTCATGATGATGATGATGAACTGAGTTTGTCACTGAGGTTGAATAATACAAGTAGCACATCATGGAGGATTCATCAACAAGGGAGGGTCACAGATAATATTATTAATGAAAAACTAATTTCAAGTTTTGCATCATCATCATCATCAGCATCACTGCAGAACAAGTTAATAATAAGGGGAACAACACATGATGATACTGCTATCACTACTCATCATCATAATCTTTCTGCAGCAGCTTCCACCACTACTCCAAACAGAAAACCTAGGGTTTCTGTTAGAGCCAGATGCGAGGAAGCCAAAATGAATGATGGGTGCCAATGGAGAAAATATGGCCAAAAAATTGCAAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGCACCGTAGCCCCGGGTTGCCCCGTTAGAAAACAGGTGCAAAGATGCTTGGATGACATGTCAATACTAATCACAACGTATGAAGGGACACATAATCATCCACTGCCGGTGGGTGCAACTGCCATGGCCGCAACAGCTTCTGCACCTGCTTCCTTTGCCCTTTCTCATGGTGTCTCTGCATCACAACCTCACTTTCCATGGATCACCAATAATAATATTAATATTAATAATAATAACGTGTCGGCAATAGCCTCAGATCCTAACAAGTTCAAGGTTGCGGTTGCGGCAGCCATAACAACTCTCTTCACCAATAATAATAATAAAGAAAGCCATCATCATCATCACGGTGGTAATGTAGCCAATTCATCATTATTTGCTACTGCAGGTACCTCTAATAACAACACCAGTAACTGGATCATAGAATCTCTCTCCAGAAACGTTAAGCCCAATTGA 1194 0.4012 MKTDLSLHIDAEQEQENKQEDDVDVDVEEEMKQTQLQLEAGEIEEDVVSLQDNKNYKTREEEDLNVLQMEMDRIKEENKALRKLVEQTMKDYYDLQMKISNNYNNKHIKDLEISVQRASPTIHDDDDELSLSLRLNNTSSTSWRIHQQGRVTDNIINEKLISSFASSSSSASLQNKLIIRGTTHDDTAITTHHHNLSAAASTTTPNRKPRVSVRARCEEAKMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLDDMSILITTYEGTHNHPLPVGATAMAATASAPASFALSHGVSASQPHFPWITNNNININNNNVSAIASDPNKFKVAVAAAITTLFTNNNNKESHHHHHGGNVANSSLFATAGTSNNNTSNWIIESLSRNVKPN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00875 397 MobiDBLite consensus disorder prediction 1 24 - -
Aip10g00875 397 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 315 388 - -
Aip10g00875 397 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 4 305 - -
Aip10g00875 397 Gene3D WRKY domain 207 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g00875 397 SUPERFAMILY WRKY DNA-binding domain 216 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g00875 397 MobiDBLite consensus disorder prediction 1 15 - -
Aip10g00875 397 Coils Coil 57 91 - -
Aip10g00875 397 Pfam WRKY DNA -binding domain 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g00875 397 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 315 388 IPR044810 GO:0003700
Aip10g00875 397 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 305 IPR044810 GO:0003700
Aip10g00875 397 ProSiteProfiles WRKY domain profile. 217 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g00875 397 SMART WRKY_cls 222 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00875 Aip-Chr10 10610010 10612113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00875 15 312 WRKY Transcription Factor Family AT1G68150 44.625 1.45e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g00875 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00875 - - aip:107621791 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00875 10 10610010 10612113 Aip10g00875 10 10610010 10612113 ECH