Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00869 ATGGCGTCGACTGATCCGGATCTGCCACGTGACTCATGGGTGTGTTCTCTTGCAGAAGAAGCAGAAGAAGAAGCTTCCAATAACAAGGCCATGGAGGAGTTTCTGAACAACATCTACTCGTCCAACGACACGAAGAGCACTGCTGACAAGGCGAGCCTTCAGAAACAGAGGAGGATGATCAAGAACAGAGAGTCTGCGGCCAGATCCAGGGAACGCAAACAAGCTTACACCCTTGAGCTAGAATGTTTGGTTCTTCAACTTGAGGCTGAGAATACCCGATTATTAGAGGAACAGGCACAAATCAAGAGGCAGAGGTACAACCACCTCCTCCACACCATCATTCCAGTTATCCACAAGCGAGCCTTCTTCATCCAATCACGAACCCAAACACCTCTCTCTCAGATCCTCTCCCCCCCTAACTTCGATATCATCCAGAATCTTCTCCCTACCACCCACTCCGACTCCTTGCTCCTTGTCCGCTTTACCTTGTTCGGTTGCGGCGCCACCGCCATCACCATCTCCCTTACTCACAAGATCGCTGACTTCGCAGCCTTGATCACTCTCCTCAAGGCATGGACCGCCGCCTGCATTGGCGGAGACACCCAGCCGGTGGTCCCCGAACTCGCCATCGGATCTGCTCTCTTCCCTCCGAGAGAGATTCTTCCCGCCGGGATATCAGGCTCCGTGAACATCGCGGCGGAGAAGTTCACGACGAGGAGGCTGATTTTCGAGTCTTCGAAGGTAGAAGAGCTGAAGAAGAGGGTGAAAAGCGAGCTTCAGTTTGAGGCGTCGAGGGTTGAGGTGGTGCTTGGTCTCATTTGGAGATGCGCATTGTTAACTACTTCAAAACGTAAAACGCCTTCAACCTTGTTCCAGGCAGTGAACCTGCGACGACGAATGGAACCTCCGATTCCAGAGACGGCGTTGGGGAACTTGGTGTGGGCGTTTGCAGTGACTGTGGAGGAGGAGTGTGAGGTAGAGTTGCAGGTGGTAGTAAAGAAGATGAGGGATTCTTTGAAGGAATTCATGGAGAGGAAAGGCGAAAGGTTGAATAATTCAGAAGGTAGGTGTGAGGTGGTGATGGAGGATTTGAAGGAGAGGGGTGAGATGTTGAAGAAGAGTGGTAATGTGGTGTATAAGTGTTCGAGTTGGTGCAAAGTTGGATCATCACTGTATGAGGTTGATTTTGGGTGGGGGAAGCCGCTTTGGATGTGCAGCGTGAACAACATAGTGAGTAACACCGTTGCTTTGATGGATACAAGGGATGGGCATGGCGTCGAAGCTTTTGTCACCTTGGATCATCAACACATGGATTCCTTTCAACAATCTCAGGAACTCCTTCACTATGCTTTGCTTAATCCCCCTCTTCTGTAA 1374 0.5073 MASTDPDLPRDSWVCSLAEEAEEEASNNKAMEEFLNNIYSSNDTKSTADKASLQKQRRMIKNRESAARSRERKQAYTLELECLVLQLEAENTRLLEEQAQIKRQRYNHLLHTIIPVIHKRAFFIQSRTQTPLSQILSPPNFDIIQNLLPTTHSDSLLLVRFTLFGCGATAITISLTHKIADFAALITLLKAWTAACIGGDTQPVVPELAIGSALFPPREILPAGISGSVNIAAEKFTTRRLIFESSKVEELKKRVKSELQFEASRVEVVLGLIWRCALLTTSKRKTPSTLFQAVNLRRRMEPPIPETALGNLVWAFAVTVEEECEVELQVVVKKMRDSLKEFMERKGERLNNSEGRCEVVMEDLKERGEMLKKSGNVVYKCSSWCKVGSSLYEVDFGWGKPLWMCSVNNIVSNTVALMDTRDGHGVEAFVTLDHQHMDSFQQSQELLHYALLNPPLL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00869 457 Pfam Transferase family 121 446 - -
Aip10g00869 457 SUPERFAMILY Leucine zipper domain 54 106 IPR046347 GO:0003700|GO:0006355
Aip10g00869 457 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 52 104 IPR004827 GO:0003700|GO:0006355
Aip10g00869 457 Coils Coil 84 104 - -
Aip10g00869 457 CDD bZIP_plant_BZIP46 54 103 - -
Aip10g00869 457 SMART brlzneu 50 114 IPR004827 GO:0003700|GO:0006355
Aip10g00869 457 Gene3D - 233 449 IPR023213 -
Aip10g00869 457 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 57 72 IPR004827 GO:0003700|GO:0006355
Aip10g00869 457 Gene3D - 105 223 IPR023213 -
Aip10g00869 457 Gene3D - 54 104 - -
Aip10g00869 457 PANTHER F21J9.9 119 455 - -
Aip10g00869 457 PANTHER VINORINE SYNTHASE-RELATED 119 455 - -
Aip10g00869 457 Pfam bZIP transcription factor 51 106 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00869 Aip-Chr10 10545786 10548840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00869 49 119 bZIP Transcription Factor Family AT1G03970 59.155 1.72e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip10g00869 Transferase 5.4e-52 CL0149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00869 - - aip:107620102 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00869 10 10545786 10548840 Aip10g00869 10 10545786 10548840 ECH