Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00864 ATGAAGGGTATGGCGAACGTATTGAGCGGGTTGAAACCCGTGATTCTAATGGTGTTGGTGCAGGTTGCATTCACTGCTGTCAATGTCTTCTACAAGCTTGCCATCAATGATGGGATGAGTGTTAAAGTTCTCACTGCTTATCGTCTCGCTTTTGGTGCTGCTTTCACTGTTCCACTTGCTCTTGTTTCTGAAAGGAACAAGAGACCAAAGATGACTTGGAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTCTTTGGGGCAAGTTTGTTTCAGAACCTTTTCTATGAGGCACTGGCTTTGACGTCAGCAACGTTTGTGTCTGCCATCTACAACCTCATACCAGGCATCACTTTTGTGTTGGCCATAACCTTCGGTTTTGAGAAACTGAAACTGAGGGGAGCAGCTGGAAAGGCCAAGGTGTTTGGAACCCTGATTGGAATTGGTGGGGCAATGGTGTTGACTTTTGTCAAAGGGGTTCAAATTAATATATGGCCTTTCCATGTCAACCTTTTGAAGAACCCATCACATCATCATAATACGCATACAAGTAGTAACGACTTGTTGGGGGTTGTGTGCGCCATTGCTAGCTGCTTCTCTTATGCTTCTTGGCTCATCATTCAGGCTAAGATGACCAAGGAATACCCAAGTCATAACTCAAGCACAGCTTTGATGCTTACAGCAGCAGCTATTCAAGCCACTGTTTTTGCTTTTTGCACTGAGAGGGATCTCCATCAATGGAAGCTTGGTTGGAATATCAGGCTTTTGGCTTCTGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTTTCTCATCATAGCATGGTGCATACAAATGAGAGGGCCATTATTTGCCTCCATTTTCAACCCTCTCATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTCATGTTGGATGAGCAATTGTATCTTGGAAGTGTGATTGGAGCAGTGGTGATAGTGTGTGGACTATACATGGTTCTATGGGGAAAGAACAAAGAGATGAAAAAGGTAACTCAGTTGCTGCCATCTGAAATCATGCAATTACAGCAGCAGCAGGATCAACAACAGACTATACAAGTTGTTGTTACGTCCACGCCAGTTGTCAAATGTGAGCAACAACAATAA 1122 0.4439 MKGMANVLSGLKPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALVSERNKRPKMTWRVLFMSFLCGFFGASLFQNLFYEALALTSATFVSAIYNLIPGITFVLAITFGFEKLKLRGAAGKAKVFGTLIGIGGAMVLTFVKGVQINIWPFHVNLLKNPSHHHNTHTSSNDLLGVVCAIASCFSYASWLIIQAKMTKEYPSHNSSTALMLTAAAIQATVFAFCTERDLHQWKLGWNIRLLASAYSGIVGSGVVFLIIAWCIQMRGPLFASIFNPLMLVLVAVAASFMLDEQLYLGSVIGAVVIVCGLYMVLWGKNKEMKKVTQLLPSEIMQLQQQQDQQQTIQVVVTSTPVVKCEQQQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00864 373 PANTHER WAT1-RELATED PROTEIN 12 352 IPR030184 GO:0016021|GO:0022857
Aip10g00864 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 331 - -
Aip10g00864 373 PANTHER WAT1-RELATED PROTEIN 12 352 - -
Aip10g00864 373 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Aip10g00864 373 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Aip10g00864 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00864 Aip-Chr10 10494585 10496275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00864 11 337 Nodulin-like Gene Family AT1G25270 43.731 1.33e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00864 - - gmx:100798755 531.561