Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00863 ATGAAGAACATGTGGAAGGTGGTGGAAGTGGTGAAGCCGGTGGTGTTGATGGTGATTGTGCAGATAGCAAATGCATGGGTCAATGTTCTCTACAAGCTTGCTGTCAACGATGGCATGAGCCTCAGAGTAGTTGTTGCCTACCGCTATATCTTCGCTACTGCTTTCATTGCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGGACAAAGATGACTTGGACCATTCTCTTTCAGTCATTCTTGTGCGGTTTATTTGGGGGAGCATTGCCTCAGAACTTACAAATGGAAGCGCTTGCTTTAACTTCTGTAACATTTGCAACCGCCATATCCAACCTGATTCCGGCCATCACCTTCATCTTGTCCCTCTCCTTCGGAATGGAGAGGTTGAATCTAAGAAAAGCAGCAGGGAAGGCGAAGATAATAGGAACAATGATTGGAATTGGCGGGGCAATGTTGATGACATTCTATAGAGGCGTGGAAGTTAAGATGCTATCCTTCCACATTAACCTCTTCAATCAGCGAAATGGCGGCGGCGCCGTACACTCGTCACATGGTGGCGGAGGGTTGTTCTTGCTGGGTGCTGTGTCGTCGTTCTCCAGCAATGCGTCTTATGCGTTGTGGCTGATCATTCAGGCGAAGATGAGTAGAGCATATCCGTATCCATATTCAAGCACTGCACTCATGTGTGTAATGGGAGCAATTCTTTCTGTCACCTTCACATTTTGTGTTGAGAGGGATTTGAGTCAGTGGAAGTTGGGTTGGAATGTCAGGCTACTCACTGTAGCTTACGCGGGTATAGTGGTTTCAGGAGTGATGGTGGCTGTGATATCGTGGTGCGTACGCATGAGAGGTCCCTTGTTTGTCTCTGTTTTTAGTCCTCTCATGCTAGTGGTTGTTGCCTTTGCTGGATCCACCATTCTTGATGAGAAGCTATATCTTGGAAGCATAATTGGATCGTTGTTAATTGTGTGCGGCTTATACCTGGTTCTATGGGGTAAAAGCAAAGAGAAGGTGAAGAATCAATTAGTGCCATCAAAAAGCGACAAACTTGAAATAGTGGTCAAGCCTCAAGTACATGGCATCCATGGGGATGATGAAGATCAAGATTCATTCAAAAAAGGAGGAGAACAACATTAA 1137 0.4565 MKNMWKVVEVVKPVVLMVIVQIANAWVNVLYKLAVNDGMSLRVVVAYRYIFATAFIAPLAYILERKTRTKMTWTILFQSFLCGLFGGALPQNLQMEALALTSVTFATAISNLIPAITFILSLSFGMERLNLRKAAGKAKIIGTMIGIGGAMLMTFYRGVEVKMLSFHINLFNQRNGGGAVHSSHGGGGLFLLGAVSSFSSNASYALWLIIQAKMSRAYPYPYSSTALMCVMGAILSVTFTFCVERDLSQWKLGWNVRLLTVAYAGIVVSGVMVAVISWCVRMRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSIIGSLLIVCGLYLVLWGKSKEKVKNQLVPSKSDKLEIVVKPQVHGIHGDDEDQDSFKKGGEQH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00863 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 335 - -
Aip10g00863 378 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Aip10g00863 378 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Aip10g00863 378 MobiDBLite consensus disorder prediction 359 378 - -
Aip10g00863 378 PANTHER WAT1-RELATED PROTEIN 12 350 - -
Aip10g00863 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Aip10g00863 378 PANTHER WAT1-RELATED PROTEIN 12 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00863 Aip-Chr10 10470523 10474819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00863 3 349 Nodulin-like Gene Family AT1G68170 44.957 4.35e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00863 - - adu:107486536 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00863 10 10470523 10474819 Aip03g04638 03 130563833 130569205 PCT