Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00859 ATGGCAGATACAATCCAACCATTTCACTGTGCTGAATCCAACAACAACCCCAAGTCTTCAAAGGTCTTCGACATGGATCTGGAGAAGGTAACGCCGGAGGAAGTGGAGGTTTTTGACTATGCCAAGAGGGCACAGTGGCTTAGGGCTGCAGTTTTGGGTGCAAACGATGGCTTGCTATCAACAGCATCCCTCATGATGGGCGTTGGAGCCGTCAAACAAGATGTTAAGACCATGATCCTCACCGGAGTTGCCGGTTTGGTGGCCGGAGCTTGCAGCATGGCAATTGGAGAGTTTGTCTCCGTCTATTCCCAGTATGATATCGAGTTGGCGCAGATGAAGAGGGAAGGCAACACGCAAGACAAAAACAAACTTCCTAACCCTTATACTGCGGCCACCGCCTCCGCCGTCGCCTTCTCAGTCGGGGCCTTGGTGCCCCTACTGGCTGCCGCCTTCATAAAAGATTATAAGGTGAGGTTAACGGTGGTGGTGGCGGTGGTGAGCCTTGCCTTGTTGGTGTTTGGAGGGGTGGGTGCTGTTTTAGGGAAAGCACCATTTGTGAAGTCATCTTTGAGGGTCTTGATCGGAGGATGGTTGGCCATGGCGGTTACTTTTGGGCTAACCAAGTTGGCTGGTCATGTTGGAGTTTGA 648 0.5185 MADTIQPFHCAESNNNPKSSKVFDMDLEKVTPEEVEVFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVKQDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDIELAQMKREGNTQDKNKLPNPYTAATASAVAFSVGALVPLLAAAFIKDYKVRLTVVVAVVSLALLVFGGVGAVLGKAPFVKSSLRVLIGGWLAMAVTFGLTKLAGHVGV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00859 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 211 IPR008217 GO:0005384|GO:0030026
Aip10g00859 215 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 11 211 - -
Aip10g00859 215 Pfam VIT family 47 120 IPR008217 GO:0005384|GO:0030026
Aip10g00859 215 Pfam VIT family 112 207 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00859 Aip-Chr10 10417868 10418817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00859 12 215 Nodulin-like Gene Family AT3G43660 70.244 6.72e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00859 K22736 - gmx:100811713 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00859 10 10417868 10418817 Aip10g00859 10 10417868 10418817 ECH