Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00858 ATGGTTGGAAGTGGCCATTTGGGCGCCAACGGAACAGTTGAACCATTGCCCGAGGATTTTGATGCGTCAGCTGTGATCAAAGAACCTGTGCCACCCACAGTTGCAGAAAGTGAGAACGTGAAAAGAGCTATTGTACTGGGAAAAAATGTTCACACACTGTGTCTAGAAGTTACAGAACCTGATGCAGATGATGAGATTACTGGGGAAAGGGATGCTTACATGGCAAGTGTATTGTCCAAATACAAAAAATCATTGACTGAAAGGACAAAACATCATTTAGGTTACCCCTATAATTTGGATTTCGACTACGGTGCACTCTCTCAACTTCAGCACTTCTCCATAAACAACCTGGGAGATCCATTCATTGAAAGCAATTATGGAGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGACTGGTTTGCCCGGTTATGGGAAATAGAGAAAGATGAGTACTGGGGCTATATGACAAACTGTGGTACTGAGGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTCCTTCCGGATGGGATTTTGTACGCCTCACAAGAATCACATTATTCTGTATTTAAAGCTGCACGTATGTACAGAATGGATTGTGTGAAGATTGCAACTCTTCATACCGGAGAGATTGATTGTAATGATTTTAAGGCCAAGCTGCTTCTTCACAAAGATAAGCCAGCTATTGTAAATGTGAACATAGGTACAACTGTCAAAGGAGCAGTGGATGATCTTGATCTGGTGATAAAGACACTTGAAGATATTGGATTTTCACGTGACAAATTCTACATCCATTGTGATGGGGCCTTGTTTGGTCTCATGATGCCTTTTGTGAAACTTGCACCAAAAGTTTCTTTTAAGAAGCCCATTGGTAGTGTTAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCAATGCCTTGTGGTGTTCAGATAACAAGATTGGAGCATATCAATGTTCTTTCCAATAATGTAGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGCCGGAATGGCCATGCTCCCATATTCCTTTGGTATACGCTTAACCGGAAAGGATACAGAGGTTTCCAGAAAGAAGTGCAGAAATGCCTGAGGAATGCACACTACTTCAAGGACCGCCTTAGGGAGGCCGGAGTTGGTGCAATGCTTAATGAGCTGAGCAGCACAGTTGTGTTTGAGAGGCCACATGATGAGGAGTTTGTACGGAAGTGGCAGTTGGCATGCCAGGGAAACATAGCACATGTGGTGGTGATGCCAAATGTCACTAAGGGTAAGCTTGATGATTTTCTGAACGAGCTTGTGGAGAAGCGCGCTCAATGGTTCAAAGATGGCAAGTTTCAACAATATTGCATTGCCTCAGAAGTGGGTGAAACCTGTTGTCTTTGCCCTTTGCACAAGGGCAAGTGA 1416 0.4414 MVGSGHLGANGTVEPLPEDFDASAVIKEPVPPTVAESENVKRAIVLGKNVHTLCLEVTEPDADDEITGERDAYMASVLSKYKKSLTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKDEYWGYMTNCGTEGNLHGILVGREVLPDGILYASQESHYSVFKAARMYRMDCVKIATLHTGEIDCNDFKAKLLLHKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEDIGFSRDKFYIHCDGALFGLMMPFVKLAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINVLSNNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLREAGVGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTKGKLDDFLNELVEKRAQWFKDGKFQQYCIASEVGETCCLCPLHKGK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00858 471 Gene3D Aspartate Aminotransferase, domain 1 352 440 IPR015422 GO:0003824
Aip10g00858 471 Gene3D - 107 351 IPR015421 GO:0003824
Aip10g00858 471 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 293 314 IPR021115 GO:0016831
Aip10g00858 471 PANTHER SERINE DECARBOXYLASE 7 469 - -
Aip10g00858 471 Pfam Pyridoxal-dependent decarboxylase conserved domain 179 392 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip10g00858 471 PANTHER - 7 469 - -
Aip10g00858 471 SUPERFAMILY PLP-dependent transferases 87 443 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00858 Aip-Chr10 10407832 10412238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00858 K25193 - gmx:100785163 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04634 03 130551065 130552574 Aip10g00858 10 10407832 10412238 PCT