Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00856 ATGGATTTGCTTGGGCCTGGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGATTTTCTACATAGAGATATAAAGCCTGACAACTTTCTCATGGGACTTGGTCGGAAAGCAAACCAGAAATTCAGGAGGCAAAAATTGGGCATGAAAATAAGCACTCTAGAAGCAAATAATCAAGACAAAAGAAGGATTGGAGTGAGGACAGATTATCATGACAAAGTACACCAAAAACTATGA 306 0.3824 MDLLGPGLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKDFLHRDIKPDNFLMGLGRKANQKFRRQKLGMKISTLEANNQDKRRIGVRTDYHDKVHQKL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00856 101 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00856 101 PANTHER CASEIN KINASE-RELATED 1 62 - -
Aip10g00856 101 SUPERFAMILY Protein kinase-like (PK-like) 1 58 IPR011009 -
Aip10g00856 101 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 62 - -
Aip10g00856 101 Gene3D Transferase(Phosphotransferase) domain 1 1 70 - -
Aip10g00856 101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00856 Aip-Chr10 10402039 10405436 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip10g00856 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00856 K08960 - aip:107639890 128.257