Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00854 ATGGCTGCATTTGTACCCTCTGATATGGTTTCAACCAACCATAACAATGGTGGAGTTTTAGTTGTTGCAATCAACAACAAAGACGAGAAGGGACAACAAATGATGAGTGAAGAAAAAGAAGAAGAAGAAGAAGAAAAGAAGATTGACTACTCGCAAAGAGCACAGTGGCTTCGTGCGGGTGTAATGGGAGCCACGGACGGATTAGTATCAGTGGCTTCGTTAATGATGGGAGTGGGAGCGGTTCGAACCGACGCAAAAGCAATGCTTCTTGCTGGTTTTGCAGGATCAGTTGCAGGAGGTTGTAGCATGGCAATAGGTGAGTTTGTTTCTGTGTACACACAGTATGAAGTCGAAGTTGCTCAAATCAAGAACAAAACAATTTCTCAAGACGTGCAAATGGTTAAGAAAGCGTTACCTAATCCATTGCAAGCTGCATTGGCATCTGCATCGTGTTATTGTTTAGGTGCGGTGCCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACTACCGTACAAGGATTATGGTGGTTTTGGCGGTGGCTACTCTCTCTTTGTTTGTGTTTGGTTGGATTGGCTCTGTCCTTGGAAACACACCAATGCTTAGGTCTTGTGCTAGGCTTCTTCTTGGTGGATGGATGGCTATGGCTATTACTTTTGCCTTAACCAAATTGTTTGCTTTTACCGGTTTGCAATTCTGA 696 0.4411 MAAFVPSDMVSTNHNNGGVLVVAINNKDEKGQQMMSEEKEEEEEEKKIDYSQRAQWLRAGVMGATDGLVSVASLMMGVGAVRTDAKAMLLAGFAGSVAGGCSMAIGEFVSVYTQYEVEVAQIKNKTISQDVQMVKKALPNPLQAALASASCYCLGAVPPLVGAAFIRDYRTRIMVVLAVATLSLFVFGWIGSVLGNTPMLRSCARLLLGGWMAMAITFALTKLFAFTGLQF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00854 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 225 IPR008217 GO:0005384|GO:0030026
Aip10g00854 231 Coils Coil 27 47 - -
Aip10g00854 231 Pfam VIT family 57 126 IPR008217 GO:0005384|GO:0030026
Aip10g00854 231 Pfam VIT family 134 221 IPR008217 GO:0005384|GO:0030026
Aip10g00854 231 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 26 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00854 Aip-Chr10 10391968 10392663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00854 41 229 Nodulin-like Gene Family AT3G43660 57.672 2.26e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00854 K22736 - gmx:547974 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00854 10 10391968 10392663 Aip10g00854 10 10391968 10392663 ECH