Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00853 ATGGTGTTGACAAGTTGTTGTGAGGGTCAGTTTATTCTTCAAGTGGGTTTCTACAGAAACACGTGTCCTGAAGCTGAGTCCATTGTCCATGGCGTAGTGAGAGACGCCGTTGCCTCTGACCCCAACATGGGGGCGGCCTTGCTCAGGCTTCACTTCCATGACTGCTTTGTTGAGGGATGCGACGCTTCCATTCTCATCGACGTGTCATCACAGCCGGAGAAGCTTGCATTTGCTCATCAAGGCCTCAGAGGCTTTGAGGTCATTCAGAGAGCCAAGGCTCAATTGGAAGCTTCTTGCCCTGCCCTTGTTTCTTGTGCTGACATTCTCGCTTTGGCTGCCAGAGACGCCATTGCTCTGACCAATGGACCAATATATCAAGTTCCAACTGGACGCAGAGATGGTTTCGTTTCCAATTTTAGCCTTGCAGATGAAATGCCTCAAGTTACTGATTCTATTCAGATACTCAAGGCCAAGTTCCTCAACAAGGGTCTCACCCACAAAGACCTTGTTCTTCTCTCTGCATGCTTCTTCATGACAAAAAGGCTATACAACTTCTTCCCGGGTGGTGTGGGAACAGACCCAGCTATCAACCCAAACTTCCTCCCAAGGCTGAAGGCTAGGTGCCCTCAAAACGGCGATGTTAACGCTCGCCTCGCCATCGATGAAGGCGGTGGGACGGAATTTGACAAACACATTCTCAAGAACATAAGGGAAGGTTTTGCTGTCTTAGAATCTGATGCTAGGCTTAATGATGATATATTCACCAAGAGTGTTATGGATTCCTACTTTAGTCCCCTTAATCCAATTTTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCTATTGTGAAAATGGGCCAAGTTGGTGTCAAGACTGGTTTTCTTGGAGAGGTTAGGCGAGTTTGCTCAAGATTCAATTCATGA 924 0.4708 MVLTSCCEGQFILQVGFYRNTCPEAESIVHGVVRDAVASDPNMGAALLRLHFHDCFVEGCDASILIDVSSQPEKLAFAHQGLRGFEVIQRAKAQLEASCPALVSCADILALAARDAIALTNGPIYQVPTGRRDGFVSNFSLADEMPQVTDSIQILKAKFLNKGLTHKDLVLLSACFFMTKRLYNFFPGGVGTDPAINPNFLPRLKARCPQNGDVNARLAIDEGGGTEFDKHILKNIREGFAVLESDARLNDDIFTKSVMDSYFSPLNPIFGPSFEADFVESIVKMGQVGVKTGFLGEVRRVCSRFNS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00853 307 PRINTS Plant peroxidase signature 102 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 280 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 167 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 121 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Plant peroxidase signature 83 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 CDD secretory_peroxidase 13 305 IPR033905 GO:0004601|GO:0042744
Aip10g00853 307 PRINTS Haem peroxidase superfamily signature 103 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PRINTS Haem peroxidase superfamily signature 121 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 Pfam Peroxidase 31 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 PANTHER PEROXIDASE 25-RELATED 9 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 Gene3D Peroxidase, domain 2 146 285 - -
Aip10g00853 307 Gene3D - 16 306 - -
Aip10g00853 307 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601
Aip10g00853 307 PANTHER PEROXIDASE 9 304 - -
Aip10g00853 307 SUPERFAMILY Heme-dependent peroxidases 13 306 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip10g00853 307 ProSiteProfiles Plant heme peroxidase family profile. 12 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00853 Aip-Chr10 10390214 10391619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00853 13 306 Peroxidase AT1G77100 50.329 4.78e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00853 K00430 - gmx:547549 461.455