Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00851 ATGAAGCCAAGTCTCGCTGCATGTGCTCTCTGTGCCTGCCGCTCAGTTCTTTCTCGGATCTACTCTCTTCTTCCTCCTCTGTGTCCACCACCACCACATTCCACCACGAACATTGCAACCACCACCGCCAAGCCTCTTTCAGGAATTGCCAACTGCCATCACCGCCAGTTTGCTGCCAAATCCCATAATCATCACCATCGATCATCTCGGCAGTCTCACATAACGACACCGCAACACCATTCTTGTCCTCATTTGAAGCCTGGATGCACTCTCTCTGCACAATCCGATCCCACACACAGCGCCACCATGGTGAACGTTCCAAAGACAAAGAAGACCTACTGCAAGAGCAAGGAATGCAGGAAGCACACACTGCACAAGGTTACCCAATACAAGAAGGGTAAGGATAGCATTGCTGCTCAAGGAAAGCGTCGTTATGATCGCAAACAGTCCGGTTATGGTGGTCAGACTAAGCCCGTCTTCCACAAGAAGGCAAAAACCACCAAGAAGATTGTCCTGAGGCTGCAATGCCAGGGTTGCAAGCATGTGTCTCAACATCCAATTAAGAGGTGCAAGCACTTTGAGATTGGTGGTGACAAGAAGGGAAAGGGAACCTCTCTGTTCTAG 624 0.5016 MKPSLAACALCACRSVLSRIYSLLPPLCPPPPHSTTNIATTTAKPLSGIANCHHRQFAAKSHNHHHRSSRQSHITTPQHHSCPHLKPGCTLSAQSDPTHSATMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00851 207 MobiDBLite consensus disorder prediction 130 158 - -
Aip10g00851 207 MobiDBLite consensus disorder prediction 58 73 - -
Aip10g00851 207 Gene3D - 103 207 - -
Aip10g00851 207 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 55 207 - -
Aip10g00851 207 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 55 207 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aip10g00851 207 ProSitePatterns Ribosomal protein L44e signature. 165 176 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aip10g00851 207 Pfam Ribosomal protein L44 121 196 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aip10g00851 207 MobiDBLite consensus disorder prediction 58 82 - -
Aip10g00851 207 MobiDBLite consensus disorder prediction 130 150 - -
Aip10g00851 207 SUPERFAMILY Zn-binding ribosomal proteins 104 196 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00851 Aip-Chr10 10384287 10386337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00851 103 207 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 92.381 2.06e-67 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00851 K02929 - tcc:18608503 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04625 03 130507964 130512492 Aip10g00851 10 10384287 10386337 PCT