Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00838 ATGGGAAACGTGGAGATGGTGACTTCAACTTGCAAGGGTTCTTTTCTTGTTTGTGCAATTTTGGTGCTTGATTTGGTGCTTAAGGTCTCTGGCAATGCAGAAGGTGATGCCCTAAATGCATTGAAGAGCAACTTACAAGATCCTAACAATGTTCTTCAAAGCTGGGATGCCACCCTTGTCAATCCATGCACATGGTTTCATGTTACATGCAATAGTGATAATAGTGTGACCCGTGTTGATCTTGGAAATGCAGATCTATCGGGTACATTGGTTCCAAACCTTGGTAATCTACCAAATTTACAGTACCTGGAGCTTTATAGTAATAATATAACTGGAAAAATCCCAGACGAGCTTGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAATGTGCTAACTGGTCCAATACCAGCTACATTGGGCAAGCTTAGTAATCTACGCTTCCTGCGTCTCAACAATAACACCTTGTCAGGAGGCATTCCCATGTCTTTGACCGGGATCACTTCACTGCAAGTTCTTGATCTCTCAAACAACCACCTAAAAGGAACTGTGCCAGTCAATGGTTCATTTTCATTGTTTACTCCGATCAGTTATCAAAATAATCCTGACTTGATACAACCAAAGAATGCTCCTTCTGCACCATTATCTCCTCCATCAGCACCTTCTTCAGGTAACAGTGCTACTGGAGCTATTGCTGGAGGAGTTGCTGCAGGTGCTGCTTTGTTGTTTGCAGCCCCTGCTATCGCACTTGCATATTGGCGAAGAAGGAAGCCTCAGGATCATTTCTTTGATGTCCCTGCTGAGGAGGATCCTGAAGTTCACCTAGGCCAGCTTAAAAGGTTTTCGCTGCGTGAGCTGCAAGTTGCAACAGATAACTTTAGTAACAAACATATTCTTGGTAGAGGTGGATTTGGGAAGGTATATAAAGGGCGTTTAGCTGATGGTAGTCTTGTAGCAGTAAAAAGGCTGAAAGAGGAGCGCACACAGGGTGGGGAGCTGCAATTTCAAACAGAGGTGGAAATGATCAGCATGGCCGTGCATCGCAATTTGCTTCGGCTCCGTGGTTTTTGCATGACACCTACTGAACGGTTGCTTGTGTATCCTTTCATGGTTAACGGAAGTGTGGCATCATGTTTACGAGAACGTAATGAATCTCAACCGCCACTTGACTGGCCAATACGCAAGCGTATTGCATTGGGAGCTGCTAGGGGGCTTGCTTATTTGCACGACCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTATTGGATGAAGAATTTGAAGCAGTTGTTGGAGATTTTGGCTTAGCGAAACTTATGGATTACAAAGATACTCATGTTACCACTGCTGTACGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCAACTGGGAAGTCGTCAGAGAAGACTGATGTTTTTGGATACGGTGTGATGCTTCTTGAACTAATAACCGGGCAGAGGGCTTTCGATCTGGCTCGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTTAAAGGGCTTCTTAAAGACAAGAAGTTGGAAACACTGGTTGACGCGGATCTGCAGGGCAATTATATCGATGAGGAGGTAGAGCAGTTAATCCAAGTAGCGTTGCTATGCACACAAGGCTCCCCTATGGAAAGACCGAAGATGTCCGAGGTGGTTAGAATGCTAGAAGGCGACGGTTTGGCCGAAAAATGGGAGCAGTGGCAGAAAGAGGAGATGTTCCGTCAAGATTTCAACCACATCCATCACCCCAATGCAAATTGGATAGTAGACTCTACTTCTCACATCCAAGCAGATGAACTATCTGGTCCTAGATGA 1857 0.4448 MGNVEMVTSTCKGSFLVCAILVLDLVLKVSGNAEGDALNALKSNLQDPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGTLVPNLGNLPNLQYLELYSNNITGKIPDELGNLTNLVSLDLYLNVLTGPIPATLGKLSNLRFLRLNNNTLSGGIPMSLTGITSLQVLDLSNNHLKGTVPVNGSFSLFTPISYQNNPDLIQPKNAPSAPLSPPSAPSSGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERNESQPPLDWPIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLQGNYIDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKEEMFRQDFNHIHHPNANWIVDSTSHIQADELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00838 618 SUPERFAMILY Protein kinase-like (PK-like) 274 570 IPR011009 -
Aip10g00838 618 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00838 618 ProSiteProfiles Protein kinase domain profile. 295 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00838 618 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Aip10g00838 618 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Aip10g00838 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Aip10g00838 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Aip10g00838 618 Gene3D Ribonuclease Inhibitor 31 215 IPR032675 -
Aip10g00838 618 Pfam Protein kinase domain 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g00838 618 PANTHER BNAA08G11770D PROTEIN 17 618 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aip10g00838 618 CDD STK_BAK1_like 301 572 - -
Aip10g00838 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 618 - -
Aip10g00838 618 MobiDBLite consensus disorder prediction 205 228 - -
Aip10g00838 618 SUPERFAMILY L domain-like 34 198 - -
Aip10g00838 618 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515
Aip10g00838 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00838 Aip-Chr10 10196034 10202014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00838 20 618 Receptor kinase-like Gene Family AT4G33430 78.737 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip10g00838 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00838 K13416 - gmx:100800522 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00838 10 10196034 10202014 Aip10g00838 10 10196034 10202014 ECH
Aip03g04612 03 130353013 130357413 Aip10g00838 10 10196034 10202014 PCT