Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00830 ATGAAGCCTTTAGAGACATTATTCTCAATCTCAGACAACTCCTCCTTAATGAGGAAATATAAGGGGAAAAGCAAAACAAGAAAATTGTGTCTATGCCTCCAATCAATCTTCCCTATCTTAGATTGGGGAAGATATTACACTATCCGAAACTTGAGAGGTGATTTCATTGCTGGACTCACCACTGCAAGTCTCTGCATTCCTCAGGATATTGCATATGCCAAGCTTGCAAATTTGGACCCTCACCATGCACTATACGCAAGCTTTGTGACACCTCTTGTGTATGCTGCCATGGGAAGCTCAAGAGACATTGCTATAGGACCTGCAGCTGTGGTCTCACTCTTGCTTGGAGCTATGCTTTCTCATGACATTAGAGACTACAAGAGCCATGAATATCTACGTCTTGCCTTCACTGCTACATTCTTTGCCGGAGTTACTCAGCTCGCACTCGGCGTTCTTAGGCTCGGTTTCTTGATAGACTTCTTATCTGATGCTGCCATTGTGGGATTCATGAGTGGAGCTGCCATTATTATTTCACTTCAACAGCTTAAAGGCCTCCTTGGCATACCACACTTTACTAAGAAAACTGATGTTATTTCTGGCATTGGCTCAGTTAAGAGCGCTATAGTGCACCATGAGTGGAATTTGGAGACAATTATCATTGGAACATCATGCTTGATCTTCCTTCTTATAACCAAGTATATTGGTAAAAAGCATAAGAAACTCTTCTGGGTAGCTGCAATTGCTCCTATGACTTGTGTTATAGTTTCCACCATTTGTGTCTACATTACAAGGGCTGATGAGAAAGGCGTATCAACTATTAAGCACATCAAGGGAGGTCTTAACTCAGTTTCTGCTAATGAAATTTTCTTTAGAGGAAAATATGTTGTACGAGGTTTTCGGATTGGTGCTGTTGCTGGTATAGTAGCACTCACGGAAGCTGTATCAATTGGGAGAACATTTGCAGCCATGAAACATTATACACTGGATGGTAACAAGGAAATGGTTGCAATGGGAACCATGAACATTGTTGGTTCTTTGACATCCTGCTTTGTGGCCACAGGATCTTTCTCTCGGTCAGCAGTGAACAACATGGCTGGTTGTGAAACTGCAGCATCAAACATAGTTTTGTCCATTGTTGTATTGTTAGTACTAACATTGTTTACACCTGTGTTTAAGTACACTCCAAATGCAGTGCTTTCTTCAATCATAATAGCAGCTACAACAAACTTGGTGAACATAAATGCAGTTATCATGATATGGAAGATTGACAAATTTGACTTCATGGCTTGCATGGGAGCCTTCTTTGGTGTCATATTCATTAATCTTGAATATGCCCTTATAATTGCGGTGTCAATATCTTTTGTGAAAATATTGTTTAGAGTGACATGGCCAAAGGTTGTAGTACTTGGTAAAATTCCAGGTACTTCTATTTACAGGAACATTGAGCAATACCCTAAGGCATTCCAGATTACTGCCATGCTGATTCTTAGGGTTGATTCTCCTATCTACTTCACTAACTGCAACTTTGTCAAGGACAGAATTCTGAGATGGTTGCGTTATGAAAATGAGGAGAGAGCAGAATGTGAATTAGCCGAAATAGAATATGTGGTTGTTGACATGTCAGCCGTTAGCGATATTGACTCGAGTGGCATCCGTTCATTTGAAAGGCTATATCATAGCCTTGAGAAAATACATGTCCAGCTTGTGTTGGCAAACGTGGGGAAGATTGTAATGGAGAAGTTGCAGGAATCCAAGTTAACAGAGTTAATTGGACGAGATAAAATATTCCTCTCAGTTGCTGGTGCTGTTATTACTTATGGTCCCAAGAGGGAAGAACTCTAA 1842 0.4061 MKPLETLFSISDNSSLMRKYKGKSKTRKLCLCLQSIFPILDWGRYYTIRNLRGDFIAGLTTASLCIPQDIAYAKLANLDPHHALYASFVTPLVYAAMGSSRDIAIGPAAVVSLLLGAMLSHDIRDYKSHEYLRLAFTATFFAGVTQLALGVLRLGFLIDFLSDAAIVGFMSGAAIIISLQQLKGLLGIPHFTKKTDVISGIGSVKSAIVHHEWNLETIIIGTSCLIFLLITKYIGKKHKKLFWVAAIAPMTCVIVSTICVYITRADEKGVSTIKHIKGGLNSVSANEIFFRGKYVVRGFRIGAVAGIVALTEAVSIGRTFAAMKHYTLDGNKEMVAMGTMNIVGSLTSCFVATGSFSRSAVNNMAGCETAASNIVLSIVVLLVLTLFTPVFKYTPNAVLSSIIIAATTNLVNINAVIMIWKIDKFDFMACMGAFFGVIFINLEYALIIAVSISFVKILFRVTWPKVVVLGKIPGTSIYRNIEQYPKAFQITAMLILRVDSPIYFTNCNFVKDRILRWLRYENEERAECELAEIEYVVVDMSAVSDIDSSGIRSFERLYHSLEKIHVQLVLANVGKIVMEKLQESKLTELIGRDKIFLSVAGAVITYGPKREEL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00830 613 Pfam STAS domain 485 602 IPR002645 -
Aip10g00830 613 CDD STAS_SulP_like_sulfate_transporter 484 599 - -
Aip10g00830 613 Pfam Sulfate permease family 51 431 IPR011547 GO:0016021
Aip10g00830 613 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 16 610 - -
Aip10g00830 613 Gene3D STAS domain 463 607 IPR036513 -
Aip10g00830 613 TIGRFAM sulP: sulfate permease 38 602 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g00830 613 ProSiteProfiles STAS domain profile. 483 606 IPR002645 -
Aip10g00830 613 SUPERFAMILY SpoIIaa-like 489 603 IPR036513 -
Aip10g00830 613 PANTHER SULFATE TRANSPORTER 16 610 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00830 Aip-Chr10 10136919 10140928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00830 5 609 Inorganic Solute Cotransporters AT1G22150 62.376 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00830 K17470 - gmx:100784124 797.734