Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00826 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAACGGTTTGGGATCTTCTTTCCTTTGTGGAGGAAAGAGGAGCCAGACACTACTTGCTAATGCTATTGCAGGCAAAGCTGGTGCTTCTGTTAGTCCTAAAAGATATGTTGTAGCTGCTGCTGCTGCACCAAAGAAATCATGGGTCCCTGGTGTTAGAGGTGGTGGAAACTTCATTGACCCTGAATGGCTTGACGGCTCGCTACCTGGTGACTATGGTTTTGACCCACTAGGCCTAGGGAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCTGAACTCATTCATGGAAGGTGGGCAATGGCTGCAGTTGTGGGAATCTTTGTTGGCCAGGCATGGAGCGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTTCACTACTGGGCACTCAGTTGCTTCTCATGGGTTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCTGATTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCGGAGAACTTTGCCAATGCCACCGGTGATCAAGGCTACCCTGGTGGCAAATTCTTTGACCCTTTGGGACTTGCTGGCACCATCAAGGATGGCGTTTACATTCCAGACAGAGAGAAGCTTGAAAGGCTAAAATTGGCTGAAATTAAGCATGCAAGGATTGCCATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGTCAAGGGAAGACTCCCCTTGGTGCTCTTGGCTTGTAA 777 0.4955 MAAATSGAVLNGLGSSFLCGGKRSQTLLANAIAGKAGASVSPKRYVVAAAAAPKKSWVPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00826 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Aip10g00826 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Aip10g00826 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Aip10g00826 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
Aip10g00826 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00826 Aip-Chr10 10112341 10113851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00826 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 83.784 1.58e-155 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00826 K08917 - gmx:100500118 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00826 10 10112341 10113851 Aip10g00826 10 10112341 10113851 ECH
Aip03g04607 03 130306050 130308893 Aip10g00826 10 10112341 10113851 PCT