Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00822 ATGGAGGGTGTTTTCAACAACAAAAAGTTCATTCTCGTGTTTGTTTTTATGCTTGGCTTGTGTATTGGTATCACCACAGTGCATGGCCAAGGTACCCGAGTAGGGTTCTATTCAAGAACTTGTCCTAGAGCCGAGTCCATTGTGAGGTCCACTGTTCGATCCCACGTTAACTCGGATCCTACTTTGGCCGCTAAAATTCTTAGAATGCACTTCCATGATTGCTTTGTCCAAGGCTGCGACGGTTCTATCCTCGTTTCTGGCCCCGCCACCGAGAAAACGGCATTTGCAAACCTCGGACTTAGAGGGTACGAGATTATTGACGATGCAAAGACACAACTCGAGGCTGCCTGTCCCGGCGTTGTGTCTTGCGCAGATATCCTCGCCCTTGCTGCTCGTGACTCCGTCGTTCTGGTAATTACATACTCCTTGCCAACAGGACGCAGAGATGGGCGCGTATCGCAAGCTTCAGATGTAAGCAACTTGCCAGCACCTTCTGACTCGGTTGATGTTCAGAAACAAAAGTTCGCAGCGAAGGGACTCAACACACAAGACCTTGTTACTCTTGTAGGTGGACACACCATTGGAACTACGCAATGCCAATTCTTCAGTAACAGATTGTTCAACTTCAATGGAACTGCTGCTGCTGACCCTGCCATTGACCCTTCATTTGTTTCAAATCTACAAGCACTATGCCCTCAAAACACCGGTGCTGCTGCAAACCGTGTTGCACTCGATACCGGAAGCCAGTTCAAGTTTGATTCCTCTTACTTCTCTAATCTCAGGAACC 787 0.4828 MEGVFNNKKFILVFVFMLGLCIGITTVHGQGTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILVSGPATEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLVITYSLPTGRRDGRVSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTTQCQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAAANRVALDTGSQFKFDSSYFSNLRN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00822 262 SUPERFAMILY Heme-dependent peroxidases 33 261 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 Pfam Peroxidase 48 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 ProSiteProfiles Plant heme peroxidase family profile. 31 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 Gene3D Peroxidase, domain 2 162 262 - -
Aip10g00822 262 CDD secretory_peroxidase 33 262 IPR033905 GO:0004601|GO:0042744
Aip10g00822 262 Gene3D - 35 161 - -
Aip10g00822 262 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Aip10g00822 262 PANTHER PEROXIDASE 25-RELATED 10 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g00822 262 PANTHER PEROXIDASE 10 262 - -
Aip10g00822 262 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00822 Aip-Chr10 10059443 10060473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00822 9 262 Peroxidase AT2G41480 60.156 5.46e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00822 K00430 - gmx:100820620 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00822 10 10059443 10060473 Aip10g00822 10 10059443 10060473 ECH