Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00814 ATGGAATCTGCTTTGTGCCTCAACATGCCGATGCAGATACAGATGAATTTAAAGCCACTCTTCAAACCTCTCAACCGTCAATTCGCCACGTGGACGATTCAATCAGCAGCGAAACAGAAGCCATCACTCGTCTTCCGCTTCAACCACTCGTCTCTGCTGCCTCCTCTACGCTGCGTTTCCAGCTCAGCTGGTGGTGGTGACATTCCCTCCGATGCTATTGTTCTCAACGTTGAGGGTATGATGTGCGACGGCTGCGCCAATAACGTCAGGAAGCTTCTAGAAAGTCGACCACAAGTGTCATCTGCTACTGTGAATCTAACCGCCGCTAAAGCAGTAGTGTCTGCCGTATCCGAAGAAAAAGGTTCCCCCAACTGGCAGAAGCAATTAGGAGAAGCACTTGCTCAGCATTTAACTAACTGCGGTTTCAATTCTACCTTTCAAGGCGAGTGA 450 0.4933 MESALCLNMPMQIQMNLKPLFKPLNRQFATWTIQSAAKQKPSLVFRFNHSSLLPPLRCVSSSAGGGDIPSDAIVLNVEGMMCDGCANNVRKLLESRPQVSSATVNLTAAKAVVSAVSEEKGSPNWQKQLGEALAQHLTNCGFNSTFQGE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00814 149 CDD HMA 74 142 IPR006121 GO:0046872
Aip10g00814 149 PANTHER ATP7, ISOFORM B 63 145 - -
Aip10g00814 149 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 63 145 - -
Aip10g00814 149 Pfam Heavy-metal-associated domain 74 120 IPR006121 GO:0046872
Aip10g00814 149 Gene3D - 71 148 - -
Aip10g00814 149 ProSitePatterns Heavy-metal-associated domain. 77 106 IPR017969 GO:0046872
Aip10g00814 149 SUPERFAMILY HMA, heavy metal-associated domain 73 118 IPR036163 GO:0046872
Aip10g00814 149 ProSiteProfiles Heavy-metal-associated domain profile. 72 146 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00814 Aip-Chr10 9936503 9937631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00814 65 145 Primary Pumps ATPases AT4G33520 59.756 6.11e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00814 - K17686 adu:107468605 293.893