Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00807 ATGGCGGAGCGTCCTTCCTTCGGATTGGGTCCTCGATTGGACTTTCAGCAACTACAATTTGAAGCCCAGCATCGCTGGTTGAGACCTGCAGAAATTTGTGAAATTCTTCGTAACTATCGGATGTTTCAAATCACGTCAGAACCTCATAACAGGCCACCAAGTGGTTCACTATTTCTATTTGATCGAAAGGTTTTGAGATACTTCAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACCGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAGAAAATGAAAATTTTCAGAGACGAAGCTATTGGATGCTTGAACCGGATATGACGCACATAGTATTTGTACATTATTTGGAAGTTAAGGGTAACAAGACAAATACTGGAGGAAATATAGATAGTTATGATGTTTCGTCTGACTCCCAAAGGACCCCTTCTCCATCATCTGGCTTACCAACAAATTATAGCAACTTGCCTTCACTGAGTACAGATTCCATGAGTCCAGCTAGCAGTTTGGCATCTTTACGTGAAGATGCTGATTCTGAGGAGATTCACCAAGCAAGCTCCAGATTACACACACTAAATGAGTCACAACATATGCGGAATGGTCACCCGACAGACAAAGTTGATACTGGTGATCGAGGACAGTCTTCAATTTCTGGAGATTATATCCCAGTTGTTCCGGCGGAAAGATTTGGAGGAAGTGATACTACTTATATTGATGGTCAGAAAGCACATAGCATGGCATCCTGGGACACTGTGTTGAAGCAATGCAATGCAGAATTGCAGAGTGATCCTTCGTTTGTACCATTTTCTTCCATACCATCGAGTTTGATAGGAAACACTGTAGAACAAGAACGTAATGACTTTGGTGACCTCTTAGGGAGCAAAAGTAGCCTCACTGAGGAGGCAGGGAGCTCGCAATCTATCCAATCAAATTGGCAGATTCCTTTTGAAGAAAGTTCAGGACGCTTGCCAAACTTAACCCAATCATTGAGTTTGGAATTTGGATCTGATTATATATCTGGTTTAGTTGGGAATGAAACTCTTAATGCAAGTTCTGAAATTGATCCTCACCTGTTTAACTTTCATGGTGAGCCGAAAGAGCAGCATGTGCAACAACACTATCCAGAACGGCATGCAGATGGACAATCTCAGTATGCACTTCAATCCAATTCTCTGAATAAAGTTCTTGGTGAAGAAAGTCTCCACCATGCTTTCACAGCAAAGCGCACATTATTGGATGGAGACGAGAGCCTGAAAAAGGTTGATAGCTTCTCTAGGTGGATTACTAAAACCCTTGGAGAGGTGGATGATTTGAATATGCAGTCTTCAGCTGGTATTTCATGGGGTACAGATGAATCTGGGCATGTGATAGATGATTCCTCATTGAGCCCGTCCCTTTCTCAGGATCAGCTGTTTAGCATAAATGAATTTTCCCCCAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGGTAATTGTTGGAGCTTTTTTGAAGTATCAACCGGAGGTGTCAACCTCTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACATGTTCGAATAGATTAGCTTGCAGTGAAGTGCGTGAATTCGACTATAGAGAAGGCTTTTCTGGAAATGTAGAATTTGCAGATTTTTATAATGATTCAACTGAAAGGCTGCTGCATTTGCGATTGGAAGAGTTTCTGTCCTCAAAACCAGTGTGCCCATCTAAACAAACCTTTGAGAATGATATGGAGAAAAGAGATGTAATTTTAAAGCTTATTTTCTTAAGAGAGGAAGAGGAATTCTCGAGTAAGGAAGAGCAACATCTAGAATCTGATACATCCTCACAGAAGGTGAAGGCGCATCTGTTTCACAGGCAGATTAAAGAGAAGCTGTACTCATGGCTTCTGCACAAAGTAACTGAAAGTGATAAAGGTCCTAATGTGTTAGATAAGGATGGACAGGGTGTTTTACATTTAGCAGCTGCTCTTGGGTATGATTGGGCTATACAACCAATTTTAACTGCTGGAGGTGGTATCAATTTCCGTGATGTGAATGGATGGACAGCCCTACATTGGGCTGCATCCTGTGGCAGAGAGCGGACGGTGGTTGTCCTTGTCACCATGGGTGCAAATTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCAACCGGAAGAACAGCTTCAGAGCTAGCCTCTACCAATGGGCACAAAGGAATCTCCGGTTTCCTTGGTGAATCTTTATTAACTAGTCATCTTGAATCCCTCACAATGGATGATCAATATAAAGGTGGCAGGCAAGAGATTTCAGTAACAAAAGTAGTGCAGACAGTTTCAGAACGAACTGCTACCCCTGTGTTATATGGGGATGATATGCCAGATGATCCCTGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAAGCTGCAGATCGTATACATCAGGTACAAGCAAATCTGGACAAGGAGATCGTTTAG 2598 0.4257 MAERPSFGLGPRLDFQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMTHIVFVHYLEVKGNKTNTGGNIDSYDVSSDSQRTPSPSSGLPTNYSNLPSLSTDSMSPASSLASLREDADSEEIHQASSRLHTLNESQHMRNGHPTDKVDTGDRGQSSISGDYIPVVPAERFGGSDTTYIDGQKAHSMASWDTVLKQCNAELQSDPSFVPFSSIPSSLIGNTVEQERNDFGDLLGSKSSLTEEAGSSQSIQSNWQIPFEESSGRLPNLTQSLSLEFGSDYISGLVGNETLNASSEIDPHLFNFHGEPKEQHVQQHYPERHADGQSQYALQSNSLNKVLGEESLHHAFTAKRTLLDGDESLKKVDSFSRWITKTLGEVDDLNMQSSAGISWGTDESGHVIDDSSLSPSLSQDQLFSINEFSPKWAYAEVETEVVIVGAFLKYQPEVSTSNWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNVEFADFYNDSTERLLHLRLEEFLSSKPVCPSKQTFENDMEKRDVILKLIFLREEEEFSSKEEQHLESDTSSQKVKAHLFHRQIKEKLYSWLLHKVTESDKGPNVLDKDGQGVLHLAAALGYDWAIQPILTAGGGINFRDVNGWTALHWAASCGRERTVVVLVTMGANSGALTDPSPAFPTGRTASELASTNGHKGISGFLGESLLTSHLESLTMDDQYKGGRQEISVTKVVQTVSERTATPVLYGDDMPDDPCLKDSLTAVRNATQAADRIHQVQANLDKEIV 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00807 865 Gene3D - 653 785 IPR036770 -
Aip10g00807 865 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Aip10g00807 865 SUPERFAMILY E set domains 490 576 IPR014756 -
Aip10g00807 865 SMART CG_1_2 18 136 IPR005559 GO:0003677
Aip10g00807 865 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Aip10g00807 865 SUPERFAMILY Ankyrin repeat 680 782 IPR036770 -
Aip10g00807 865 MobiDBLite consensus disorder prediction 141 242 - -
Aip10g00807 865 MobiDBLite consensus disorder prediction 141 188 - -
Aip10g00807 865 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Aip10g00807 865 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 856 - -
Aip10g00807 865 SMART ANK_2a 690 719 IPR002110 GO:0005515
Aip10g00807 865 SMART ANK_2a 723 752 IPR002110 GO:0005515
Aip10g00807 865 Gene3D Immunoglobulins 483 578 IPR013783 -
Aip10g00807 865 Pfam IPT/TIG domain 490 568 IPR002909 -
Aip10g00807 865 Pfam Ankyrin repeats (3 copies) 671 749 IPR002110 GO:0005515
Aip10g00807 865 ProSiteProfiles Ankyrin repeat region circular profile. 723 749 - -
Aip10g00807 865 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 856 - -
Aip10g00807 865 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00807 Aip-Chr10 9811265 9819502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00807 1 856 CAMTA Transcription Factor Family AT5G64220 48.929 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00807 K21596 - gmx:100818124 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04582 03 130106851 130115073 Aip10g00807 10 9811265 9819502 PCT