Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00778 ATGGTGTGCCAAGCGGCAAGCCAAACAAGATTTCGGGCATTAAAACATGAGAATGGAATTGAAGGCGAATCGACAATTGTTGTTAGAGTGATAGCATGCTTTCAACCCTTGCATGATTGTCAGGCTGAGTACTTTCGTCATTTGCTTAAGCCTGTCACAGAAATCAAGCTATTGAAGCAGCTTCCATATCAAAGCACCATAGCATCTACTGGTTATTTTTGTCGTTGGATGGTTAAGGATCATATGCCTTGGCCTTGCTCACAGCATATGGCTGGGTCATCACCTTGTTTGAATGTGCCGGAGCCAAACTTGTATGGTTCTTCAGCATATCTGAATCCTAGTACATTCATCTTGCCTGCGGTGAGTGTATTTCCTGGATTTGCGGCTCCTGCTGCCCCATATCTGAAGGCTGAGCCCACCAATGAAGTAGTGCAGGGGTTCCATCAGTATCTTCAGTCATTGCCAACTTTGAAAGAAATGCATACTGAAGAGGCTATGCAACTGCAAAATGCAAATTCTGTATCTTTGCAGAAGAAGTTACTTATTTTCGACCAATCTGGTAATAAGACAAGGTTGTTTTATAGTTCTGTCTTGCCTCAGTTCCAGAGTCAAGTTGTTAATGCTACGCCATATGTATACAAGGACGAAAAGGCAGCTAATTTGGGTCAAAAGCATCTACCGAACAGTTCAACAGAAGAGTCTGATAATGATCATATAGTTAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCCTTGCTTTATTCTGATGATTCTGATTTCAGTGGCGATGATGATGATGAGGTAACAAGTACAGGCCACTCTCCATTGGTTACTAAAAGGACTTATGTGATGCAAGAGCAGTATGAGGATTCAAAGGAGGAGGTTGCGAGCTCTGGTTTGCCAAACAAAAGGCGGAAGTCAATTAATGGCGAGTACTATAGATCACCAATGCCTGCAGGTACTGCGGGTTTAGCAAGACTAAATGATACCTATGAGCATGCCAGCGACGCTGAATCAAAATATTCCAGTGGCCGTGTGTATTCTGGAGGTGCTGAGCAAACTAAAGACAATAGTTCAATGGTGGATGATATTCAACTGAAAAGGGATAAAATCCGGGAATCATTGAGAGTACTTGAGAACTTAGTTCCTGGTGCAAAGGGAAAGAATCCACTGTTAGTCATTGATGAAACAATTGAGTACTTGAATTCTTTGATGACTGGTACTTCCGGAGAAGATAATATCACCAAAGGCTCATCGCCGCCATAG 1278 0.4218 MVCQAASQTRFRALKHENGIEGESTIVVRVIACFQPLHDCQAEYFRHLLKPVTEIKLLKQLPYQSTIASTGYFCRWMVKDHMPWPCSQHMAGSSPCLNVPEPNLYGSSAYLNPSTFILPAVSVFPGFAAPAAPYLKAEPTNEVVQGFHQYLQSLPTLKEMHTEEAMQLQNANSVSLQKKLLIFDQSGNKTRLFYSSVLPQFQSQVVNATPYVYKDEKAANLGQKHLPNSSTEESDNDHIVNEESEMHEDTEEINALLYSDDSDFSGDDDDEVTSTGHSPLVTKRTYVMQEQYEDSKEEVASSGLPNKRRKSINGEYYRSPMPAGTAGLARLNDTYEHASDAESKYSSGRVYSGGAEQTKDNSSMVDDIQLKRDKIRESLRVLENLVPGAKGKNPLLVIDETIEYLNSLMTGTSGEDNITKGSSPP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00778 425 MobiDBLite consensus disorder prediction 350 364 - -
Aip10g00778 425 MobiDBLite consensus disorder prediction 337 367 - -
Aip10g00778 425 Coils Coil 365 385 - -
Aip10g00778 425 MobiDBLite consensus disorder prediction 292 318 - -
Aip10g00778 425 PANTHER TRANSCRIPTION FACTOR SAC51 86 410 - -
Aip10g00778 425 PANTHER TRANSCRIPTION FACTOR BHLH145 86 410 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00778 Aip-Chr10 9522955 9524539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00778 175 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.327 4.12e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00778 - - adu:107468645 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00778 10 9522955 9524539 Aip03g03678 03 118866055 118866591 PCT