Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00772 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCCAACAAGCTCCTGAGTGCACGTGACCTGCATGGAGCTCGGTCATTTGCCATCAGGGCCCGCGAGTGTGACCCACGCTTTGAAGTCACGGAGCTACTTCTCACCGTAATCGACACCCTCGTGGCCGGCGAGGCCAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTTATTCGCTACTCACATAATCTCGACTACATCGCCGCCCAGTACCGCCGTCTCGCTGCCATTCTTGATCCACACCGCAACCCTTTCGCGTTCTCCGCCTACGCCTTCTCCCTCGTCAACGACGCATGGTCCGTACTCTCAAACCCTTCCAAGAAAGCAATCTTCGATAACGACCTCAGGCTCCTTACCGAACCTCCTCCTCCTCCTCCGCCTCCTCCGCCCCAACCCGCCCCTGTTCCTATCGTCCCTCAAGCTTTTCCAATCTTGCAGCAGAGGCATAATCTCAACAACCACCAAAACAATCATAATCAAAGCCACGACTTGAACCAGAACCAGAACCACTTCCTCCACCAGAATCCGAATCAGAATCAGAACCACCTCATCAACCAGAATCAGCAGCAGCGACAGCGTCAGCAGCAGCAGCAACAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAGAGGAGGAACGGCGAAGGCAACAACAAGAGGAGGAACGGCAACGGCAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAAAGGAGGAACGGCAAAGGCAACAACAAGAGCAAGAGCAAGAGCAACAGAAACGGCGAGAACAAGAACAAGCGCTGCAACTTCAACGGCAACAACAAGAGCACGAGCAATGGAAACGGCAACAACAAGAACAGGCGAAACTGCAACTGCAACGGCAACAGCAACAGCAGCAGCAACTGTTTTCACTGAGTAAGAACGCTATATCGACGGAAGCTCCCAGGGTTGTGGTGGTTGAGGAGGAGGAAGAGGAGGAGAGGCCGAGTCAGGACAATGTGACTCAGCTGACTGAGCCAACTCGGCCGGCTAGGGCTACTGAGTCGATTGAAACCGAGTTGAACGGAGCTTTCTGGACTGCGTGCCCTTACTGTTACGGTTTGTTTGAGTATCCGAAGGTGTACGAGGAGTGTACCTTGCTGTGCCAGAGCTGCCGGAGGCCTTTCCATGCGTTGGCGGTGAGGTCGCCGCCGGAGTTGACCGGGAAAGACGGGTTCATGTCCTTCTGCAGTTGGGGTTTTATGCCGCTAGGGTTTTCTGGTGATTTCAAGGATATAAGTGGTTCTGCTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCTGACAGATGGAGACATCTGAGAGGGCCTTGGGCTTACTATGATGATGAGGCTGCCGCCGCGTTTGTCGAGCATTCCGATACCACGGAAGATGATTCTGATGATGATGATTGGAGGAATATTAATGCGAATAAGAAGGTGGGGAGGAAAAGAAGAAGAAGAAGAAGGAATAGGAAGAGTTCTGCCACCACTGCTGGTGGCAATGCAAGCACACCAGTGGAGAGGCCTAGGAGAGGGGTTCGTAACCGTGCTGGCAATGCTGGTGTGGAAAATGGTGAGGCTGTTGGTGCTGGCTCTGCAGCAGTGCCCATTGCAGCTAGGCTAGAATCTGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAATTTGGGGAAGTTGGATCTGAATGTGGAGTTTAGTAATGATGTGGAGGAGACTGGCCATGGAGTACGCGATAGGGCGAATGCAGGTGGGACGGGTAATGCGGAGGATAACATTGAAGGGATTGGGTTTTTTGAAGGGCTTGATGAGTTCTTGAGCAGCTTGCCTATTCTCAATGCTGTTGCAGATGATAAGAAAACATGTAACCAACTTTACCTACTCATTTTTAATAATACTCCTCCTCCTTCTTCTTCTTCCAATTGCTGTGTTGAGCCTGCCACGTCACCGATCTTTGGCGGTGCTCGCAAAACAGGGAAAATTTTTGAGCAGCCACATTTGAGAATTTTGCCAGCTTTAAGGAGAAGTCAAGGTTTTGCTTTAAAGGCTTCTATGGGGTCTCCAGGATTTACACAACAACTTAATAAAAGCAAGCTAGAGACCTTATCTAAAGCTGAAGACAGATGTGATATATTTGATATTCTGAAAAATAGATTTTTAAGTTTTAAGAGTAAATATATTGAAAATGTTGAACAGTTTGAAAATCTTGCTAAGGCTCAAGCACCAAAGTTCATGGTTATTGCCTGTGCAGATTCCAGGGTTTGCCCCTCGAATATTTTGGGATTTCAACCAGGAGAAGCATTCGTGATTCGCAATGTTGCTAATTTGGTTCCCACCTTTGAGAGTGGACCCTCAGAAGTAAATGCTGCATTAGAGTTTGCTGTAAACACTCTTCAAGTTGAAAACATCTTAGTCATTGGCCACAGCTGCTGTGGAGGTATACGAGCTCTTATGAGTATGGAAGACGATGCCAATGGAAGCTTTATACACAATTGGGTTATTGTTGGGAAGAATGCAAGAAAGAAAACTGAGGCTGCAGCTTCCACCCTCAGCTTTGATGACAAGTGCAGGCATTGTGAAAAGGAATCAATTAATCACTCCTTAGTGAACCTACTAACTTATCCATGGATAGAAGAAAAGGTGGCCAATGGAAAACTTTATGTTCATGGTGGCTATTATGACTTCATTAAATGTTCATTTGAGAAATGGACATTGGATTACCAGGGAACCAAACTGGAGGAAGATGGCAGAATTGCTGCTAAACACAAAGTATTGTGGTGCTGA 2865 0.4859 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEVTELLLTVIDTLVAGEARINDLVDWYSILQVIRYSHNLDYIAAQYRRLAAILDPHRNPFAFSAYAFSLVNDAWSVLSNPSKKAIFDNDLRLLTEPPPPPPPPPPQPAPVPIVPQAFPILQQRHNLNNHQNNHNQSHDLNQNQNHFLHQNPNQNQNHLINQNQQQRQRQQQQQQQQEEERQRQQQEEERRRQQQEEERQRQQQEEERQRQQQKEERQRQQQEQEQEQQKRREQEQALQLQRQQQEHEQWKRQQQEQAKLQLQRQQQQQQQLFSLSKNAISTEAPRVVVVEEEEEEERPSQDNVTQLTEPTRPARATESIETELNGAFWTACPYCYGLFEYPKVYEECTLLCQSCRRPFHALAVRSPPELTGKDGFMSFCSWGFMPLGFSGDFKDISGSASQWNPFSALVPCPLKGADRWRHLRGPWAYYDDEAAAAFVEHSDTTEDDSDDDDWRNINANKKVGRKRRRRRRNRKSSATTAGGNASTPVERPRRGVRNRAGNAGVENGEAVGAGSAAVPIAARLESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETGHGVRDRANAGGTGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKKTCNQLYLLIFNNTPPPSSSSNCCVEPATSPIFGGARKTGKIFEQPHLRILPALRRSQGFALKASMGSPGFTQQLNKSKLETLSKAEDRCDIFDILKNRFLSFKSKYIENVEQFENLAKAQAPKFMVIACADSRVCPSNILGFQPGEAFVIRNVANLVPTFESGPSEVNAALEFAVNTLQVENILVIGHSCCGGIRALMSMEDDANGSFIHNWVIVGKNARKKTEAAASTLSFDDKCRHCEKESINHSLVNLLTYPWIEEKVANGKLYVHGGYYDFIKCSFEKWTLDYQGTKLEEDGRIAAKHKVLWC 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00772 954 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Aip10g00772 954 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 153 - -
Aip10g00772 954 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 153 - -
Aip10g00772 954 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 342 647 - -
Aip10g00772 954 Pfam DnaJ domain 67 129 IPR001623 -
Aip10g00772 954 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Aip10g00772 954 MobiDBLite consensus disorder prediction 135 154 - -
Aip10g00772 954 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 819 839 IPR015892 GO:0004089|GO:0008270|GO:0015976
Aip10g00772 954 MobiDBLite consensus disorder prediction 169 214 - -
Aip10g00772 954 Gene3D Carbonic anhydrase 730 938 IPR036874 GO:0004089|GO:0008270
Aip10g00772 954 Pfam Carbonic anhydrase 772 922 IPR001765 GO:0004089|GO:0008270
Aip10g00772 954 CDD beta_CA_cladeB 745 930 IPR045066 GO:0004089|GO:0008270
Aip10g00772 954 MobiDBLite consensus disorder prediction 482 548 - -
Aip10g00772 954 MobiDBLite consensus disorder prediction 215 278 - -
Aip10g00772 954 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 776 783 IPR015892 GO:0004089|GO:0008270|GO:0015976
Aip10g00772 954 SMART dnaj_3 66 124 IPR001623 -
Aip10g00772 954 MobiDBLite consensus disorder prediction 332 356 - -
Aip10g00772 954 MobiDBLite consensus disorder prediction 502 517 - -
Aip10g00772 954 SMART Pro_CA_2 764 931 IPR001765 GO:0004089|GO:0008270
Aip10g00772 954 Gene3D DnaJ domain 63 133 IPR036869 -
Aip10g00772 954 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Aip10g00772 954 CDD DnaJ 67 121 IPR001623 -
Aip10g00772 954 Coils Coil 194 313 - -
Aip10g00772 954 MobiDBLite consensus disorder prediction 169 281 - -
Aip10g00772 954 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 342 647 - -
Aip10g00772 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 298 IPR027417 -
Aip10g00772 954 MobiDBLite consensus disorder prediction 133 154 - -
Aip10g00772 954 SUPERFAMILY beta-carbonic anhydrase, cab 735 935 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00772 Aip-Chr10 9466111 9474027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00772 346 646 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.610 1.00e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00772 K01673 - aip:107623843 603.594