Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00764 ATGGACACTGCGAATCAGCAGAGGCTGCAAGCAAGAACCTTTGATGATGATGATGATGATGAAGCCCAACAGCAGCAACAACAGCAACAAAAAACTGTGCTTGTTCCCATGCAGGTGAATGGTGCGTTGAACCCTTTTGATGGAGGTTCTCACGAGGTGGAAGAAGCTTTCGTGAGTTCTGGGTTGTCTTCTACTGCTACTTCTGTTCAGCCAAGAACCAGTGAGCTCACCATTGCATTTGAAGGCGAGGTTTATGTTTTCCCAGCGGTTACCCCAGAAAAGGTGCAGGCTGTATTGTTACTCTTGGGAGCCCAAGAGATTCCCAGGATTGCTGCCAGCTCTGATTCTTCGTTGCAGCAGAATTGTCAGCAGATTATGGGAATAAATGATGCTTCCCGAGGCTCAAAGGTTTCACGAAGAATTGAATCACTTGTAAGGTTCCGTGAAAAGCGAAAAGACCGATGCTTTGAGAAAAAAATCCGGTACACTTGCCGTAAAGAGGTTGCCCAGAGTGAACGTAGATGTCAGCATTGTGGAACTAGTGAGAAGTCAACTCCAGCTATGCGTCGAGGACCTTCTGGTCCAAGATCTCTGTGCAACGCCTGTGGTCTTATGTGGGCAAATAAGGGAACTCTGAGAGATCTCAGCAAAGCATCAAGAGTCACTTTTGAACAAAATGGACTGGATACATCAGCTGATATAAAACCTTCACCAACAGAACCAGAGAACTCTTCTCCTGACCAGAACGAGGATATCTGCCTAGAGGAAGCCAAACCTGTGCCAATAGATTCGAGACAGTCACCTGAGAGGAACAATGATCAGTATACACTTGATACTGCGGAAGCCGTTACCAACGATTCATCTATCCAAATGGAGAATAATGCTCTCAGCATACATCAAGAGGATAATAAACTTGAAGATTTTGCTGACGCTTCTGGGACAGAATTTGATATTCCTGCCTGTTTTGATGAGCAGGTTGACATTGACATTGATGATTCCAACATGAGGACTTACTGGCTATGA 1023 0.4526 MDTANQQRLQARTFDDDDDDEAQQQQQQQQKTVLVPMQVNGALNPFDGGSHEVEEAFVSSGLSSTATSVQPRTSELTIAFEGEVYVFPAVTPEKVQAVLLLLGAQEIPRIAASSDSSLQQNCQQIMGINDASRGSKVSRRIESLVRFREKRKDRCFEKKIRYTCRKEVAQSERRCQHCGTSEKSTPAMRRGPSGPRSLCNACGLMWANKGTLRDLSKASRVTFEQNGLDTSADIKPSPTEPENSSPDQNEDICLEEAKPVPIDSRQSPERNNDQYTLDTAEAVTNDSSIQMENNALSIHQEDNKLEDFADASGTEFDIPACFDEQVDIDIDDSNMRTYWL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00764 340 MobiDBLite consensus disorder prediction 226 250 - -
Aip10g00764 340 MobiDBLite consensus disorder prediction 1 30 - -
Aip10g00764 340 Pfam tify domain 71 103 IPR010399 -
Aip10g00764 340 Pfam GATA zinc finger 175 211 IPR000679 GO:0006355|GO:0043565
Aip10g00764 340 CDD ZnF_GATA 174 217 IPR000679 GO:0006355|GO:0043565
Aip10g00764 340 ProSitePatterns GATA-type zinc finger domain. 175 202 IPR000679 GO:0006355|GO:0043565
Aip10g00764 340 SMART tify_2 69 104 IPR010399 -
Aip10g00764 340 SMART GATA_3 169 222 IPR000679 GO:0006355|GO:0043565
Aip10g00764 340 Pfam CCT motif 140 175 IPR010402 GO:0005515
Aip10g00764 340 PANTHER GATA TRANSCRIPTION FACTOR 28 172 329 IPR045280 GO:0006355
Aip10g00764 340 PANTHER GATA TRANSCRIPTION FACTOR 28 1 170 IPR045280 GO:0006355
Aip10g00764 340 Gene3D - 169 221 IPR013088 GO:0006355|GO:0008270
Aip10g00764 340 PANTHER GATA TRANSCRIPTION FACTOR 28 ISOFORM X1 172 329 - -
Aip10g00764 340 PANTHER GATA TRANSCRIPTION FACTOR 28 ISOFORM X1 1 170 - -
Aip10g00764 340 ProSiteProfiles CCT domain profile. 140 182 IPR010402 GO:0005515
Aip10g00764 340 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 171 223 - -
Aip10g00764 340 ProSiteProfiles GATA-type zinc finger domain profile. 169 225 IPR000679 GO:0006355|GO:0043565
Aip10g00764 340 ProSiteProfiles Tify domain profile. 69 104 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00764 Aip-Chr10 9314861 9318112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00764 75 233 Tify Gene Family AT1G51600 46.000 1.43e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aip10g00764 GATA 1.9e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00764 - - adu:107468732 623.239