Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00746 ATGGATGGGAACAAGGACGACGCGCTCAAATGCTTGAAAATTGGGAAACAGGCTTTAGAATCTGGGGATCGAAACCGCGCCTTGAAGTTCCTTACCAAGGCTCGCCGCCTCGACCCAACGCTTCCCGTCGACGACCTTTTGTCGGCCACAGAAGGCACTGCGGCGGCCGAGTCAAACCCTAATTCACGATTCGAAACGCCAGCGCCAACCCCCGAGGTGCGTTCCAGCGCGTCGTCGCCAAAATCGTTCTCAAACGATCAACCCTCAATCCGACGAAGGGTTTCCGCAGCTGAGCCCTCTTCGTCTTCATCATCGGCATCATATACGGAGGAGCAAGTCAGCGTGGTTAGAGAGATTCGGAGGAAGAAGAACTATTATGAGATTCTAGGGTTGGAGAAGAGTTGCACTGTGGAGGACGTGCGAAAAGCCTACAGAAAACTCTCCCTGAAGGTTCATCCTGATAAGAACAAAGCTCCGGGCTCTGAAGAAGCCTTCAAGTCCGTTTCAAAGGCGTTTCAGTGTCTCAGCAATGATGAGAATAGAAGAAAGTATGATCTTGCCGGAGAAGATGAGTCCCTCTTCGAGCAGCGGGCCGCTGCCAGGCCGGGCCCCAGGGCCTATCGCCATGGGTACTATGAGGCTGATTTTGATGCTGAGGAGATTTTCAGGAACTTCTTCTTTGGTGGGATGGCTCCTACAACCCAATTTGGTGGGTTCAGTTTTGGGCCTGGGATGGGTCCTAGGCCGGCGGATAATGGCTCCGGTGGTGGCTTCAACATTCGCGCTTTGATTCAGCTGCTCCCTGTTCTGCTGATTCTGCTGTTGAATTTCTTGCCTTCTTCGGATCCTGTGTATTCTCTTTCTAGGTCTTATCCTTATGAATTTCGGTACATTACCCCGAAGGGTGTTCACTACTATGTTAAGACAACCAAGTTCAATGAGGAGTATCCTATAGATAGCACCCAACGGGCTACAATTGAAGAAAGGGTTGAGAGGGAATACTTCAGCATTCTTCGGCAGAATTGTCGCCTCGAGGTGCAGCGTCGCCAATGGGGGTATATCCAGGAAACGCCACACTGTGAGATGCTCCGGAAGTTTGATTCCGTGAATTGA 1113 0.513 MDGNKDDALKCLKIGKQALESGDRNRALKFLTKARRLDPTLPVDDLLSATEGTAAAESNPNSRFETPAPTPEVRSSASSPKSFSNDQPSIRRRVSAAEPSSSSSSASYTEEQVSVVREIRRKKNYYEILGLEKSCTVEDVRKAYRKLSLKVHPDKNKAPGSEEAFKSVSKAFQCLSNDENRRKYDLAGEDESLFEQRAAARPGPRAYRHGYYEADFDAEEIFRNFFFGGMAPTTQFGGFSFGPGMGPRPADNGSGGGFNIRALIQLLPVLLILLLNFLPSSDPVYSLSRSYPYEFRYITPKGVHYYVKTTKFNEEYPIDSTQRATIEERVEREYFSILRQNCRLEVQRRQWGYIQETPHCEMLRKFDSVN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00746 370 MobiDBLite consensus disorder prediction 52 112 - -
Aip10g00746 370 CDD DnaJ 124 177 IPR001623 -
Aip10g00746 370 PRINTS DnaJ domain signature 126 144 IPR001623 -
Aip10g00746 370 PRINTS DnaJ domain signature 144 159 IPR001623 -
Aip10g00746 370 PRINTS DnaJ domain signature 160 180 IPR001623 -
Aip10g00746 370 ProSitePatterns Nt-dnaJ domain signature. 165 184 IPR018253 -
Aip10g00746 370 PANTHER - 1 368 - -
Aip10g00746 370 MobiDBLite consensus disorder prediction 41 113 - -
Aip10g00746 370 Gene3D DnaJ domain 120 236 IPR036869 -
Aip10g00746 370 SMART dnaj_3 123 180 IPR001623 -
Aip10g00746 370 Pfam DnaJ domain 124 185 IPR001623 -
Aip10g00746 370 PANTHER AT29763P-RELATED 1 368 - -
Aip10g00746 370 Pfam Domain of unknown function (DUF1977) 279 350 IPR015399 -
Aip10g00746 370 ProSiteProfiles dnaJ domain profile. 124 188 IPR001623 -
Aip10g00746 370 SUPERFAMILY Chaperone J-domain 121 241 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00746 Aip-Chr10 8965312 8967208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00746 119 185 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 1.15e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00746 K09518 - gmx:100788812 486.493