Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00736 ATGGACGAAGCTTCGTTGATGCGCAACACCGATTGCGTTTATTTCTTGGCCTCTCCCCTCACTTGCAAGAAGGGAGCTGAATGCGAGTATCGGCATAATGAGATTGCGAGGCTTAACCCTAGGGATTGCTGGTACTGGTTATCTGGCAGTTGCCTTAATCCAACATGTGCTTTCAGGCACCCTCCATTGGATGGCCAGACTGGAGTTTCATCTGAGCCAACACAGTCTGCTGTGCCTGCAAATAAGACAATGGTTCCCTGTTATTTTTTCTTCAATGGATATTGCAATAAAGGCGACAGATGCTCATTTTTGCATGGGCATGATGACAGCCATTTCACTGTAAAGCCTGTAAAGAATGACAAAGGAGGCACTGATCCACCCAACCTAGAGAATAAGTATGAAGAAGCTACAGTTGCAGGGTCGGAGTCTCCGTATCCAGAAGGAAGATTTGTTGATAACATCTCTCAACGATGCAGTGAGCAGGGTTCAGAGGAGCAAGTAAATGGTCACATCGAGCCTGATGAACGTTGGGAATCATCATCCCCTGGATTTGATGTTCTTGTTCATGATGAATCGGCAAACTTGGGCTATGAGGAGGATCCTGAATATCTTCCTGATGGGGAACATGAGGAACTGAATGAACAATACTTGGGGTATGAATTTGAGAACCCAGTTGAGTATGACAATATGTGCCGCAAAGCTGACATCCTGTATGAACAAGAAATGTATGATGATTATAGACGTTTAGATAGAGATCTTACTCGTGCTAATGGCAGAAGAGTTTATGATTGTTCCAGTGATATAATCTTAGATTCTATGTTGACTAGGAAAAGGATTCAGATGAGCGATATAGCTACCTGTGATGGGAAGTTAGATCTACGAGACCATCTGAGAAGACGAAGGGAAAGTAGTGGTCCACCTGATGCGAGTTTCATCAGACGACATGAATCCTCTTCTTTGATGGTTCGAAACCGGGAAAGGCATCAAAGGCATTACAATGAACAGAGACTAAGGGGAAGATTGTCATCGCAAGTGGGACTTACCACTATAGACCCCATTGGAGAGGTTGAAACTCTTTCAATTGCTAACAAGCCAAGGTTATTTAGGAATTCCCAGCAGCATTGGCCAAGGAAGCATTATAGAGAAAAGCCAGCTAAACGCCAGTTTCATTCATCTAATGACTCCAGGAGACCAGTTTTCAAGCAAAGGAGATTTGTTCACGAGTCCTCTACATTTTCAGGACCCAAGAGCCTTGCAGAAATTAGAGAAGAGAAGAAAAAGGCTGCAGGAAGTTTTCACTGCAAAAGCACATCACCTGATTTTCAGGACCCCAAACCTCTTAGTGAAATTCTCAAGGGCAAAAGGAGTGTGGACGGA 1377 0.4401 MDEASLMRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGSCLNPTCAFRHPPLDGQTGVSSEPTQSAVPANKTMVPCYFFFNGYCNKGDRCSFLHGHDDSHFTVKPVKNDKGGTDPPNLENKYEEATVAGSESPYPEGRFVDNISQRCSEQGSEEQVNGHIEPDERWESSSPGFDVLVHDESANLGYEEDPEYLPDGEHEELNEQYLGYEFENPVEYDNMCRKADILYEQEMYDDYRRLDRDLTRANGRRVYDCSSDIILDSMLTRKRIQMSDIATCDGKLDLRDHLRRRRESSGPPDASFIRRHESSSLMVRNRERHQRHYNEQRLRGRLSSQVGLTTIDPIGEVETLSIANKPRLFRNSQQHWPRKHYREKPAKRQFHSSNDSRRPVFKQRRFVHESSTFSGPKSLAEIREEKKKAAGSFHCKSTSPDFQDPKPLSEILKGKRSVDG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00736 459 MobiDBLite consensus disorder prediction 298 334 - -
Aip10g00736 459 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 84 106 IPR000571 GO:0046872
Aip10g00736 459 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Aip10g00736 459 MobiDBLite consensus disorder prediction 372 459 - -
Aip10g00736 459 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Aip10g00736 459 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Aip10g00736 459 SMART c3hfinal6 81 107 IPR000571 GO:0046872
Aip10g00736 459 MobiDBLite consensus disorder prediction 318 334 - -
Aip10g00736 459 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 133 - -
Aip10g00736 459 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 132 456 - -
Aip10g00736 459 SUPERFAMILY CCCH zinc finger 81 106 IPR036855 GO:0046872
Aip10g00736 459 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Aip10g00736 459 MobiDBLite consensus disorder prediction 386 404 - -
Aip10g00736 459 Gene3D - 72 153 - -
Aip10g00736 459 Gene3D - 2 63 - -
Aip10g00736 459 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE 1 133 - -
Aip10g00736 459 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE 132 456 - -
Aip10g00736 459 Pfam Zinc-finger containing family 8 64 IPR041686 -
Aip10g00736 459 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00736 Aip-Chr10 8713915 8716585 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip10g00736 zf-CCCH_3 3.7e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00736 - - adu:107469835 887.871